Cow genome map
| Conread name: | Thy1-THY010036D02 |
| Conread position: | 317-731 |
| Cow position: | chr3:58349089-58349499 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 335-673 |
| Cow position: | chr3:6683822-6684158 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 336-731 |
| Cow position: | chr3:2651493-2651881 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 337-732 |
| Cow position: | chr3:17949876-17950244 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 354-732 |
| Cow position: | chr3:6879841-6879470 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 359-724 |
| Cow position: | chr3:70085592-70085237 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 360-479 |
| Cow position: | chr3:24594118-24593999 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 95 |
| Conread position: | 360-721 |
| Cow position: | chr3:64359961-64359610 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 362-731 |
| Cow position: | chr3:3908620-3908267 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 26 |
| Conread position: | 365-714 |
| Cow position: | chr3:2855604-2855265 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 95 |
| Conread position: | 367-720 |
| Cow position: | chr3:15056033-15055703 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 69 |
| Conread position: | 370-733 |
| Cow position: | chr3:39325105-39325453 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 113 |
| Conread position: | 373-576 |
| Cow position: | chr3:32495916-32496115 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 85, 39 |
| Conread position: | 373-576 |
| Cow position: | chr3:65596531-65596325 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 373-720 |
| Cow position: | chr3:39408557-39408895 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 182, 89 |
| Conread position: | 373-724 |
| Cow position: | chr3:208742-208404 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 93, 89 |
| Conread position: | 373-731 |
| Cow position: | chr3:2123955-2124306 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 19, 74 |
| Conread position: | 373-731 |
| Cow position: | chr3:9715241-9715586 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 373-731 |
| Cow position: | chr3:66636479-66636823 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 195, 39 |
| Conread position: | 373-731 |
| Cow position: | chr3:69216431-69216086 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 194, 15 |
| Conread position: | 373-732 |
| Cow position: | chr3:34397575-34397227 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 89, 109 |
| Conread position: | 373-733 |
| Cow position: | chr3:61275739-61276087 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 374-649 |
| Cow position: | chr3:2632376-2632644 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 84, 122 |
| Conread position: | 376-732 |
| Cow position: | chr3:64906221-64906559 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 226, 30 |
| Conread position: | 388-724 |
| Cow position: | chr3:5646936-5646598 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 389-657 |
| Cow position: | chr3:52866388-52866133 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 179, 90 |
| Conread position: | 390-723 |
| Cow position: | chr3:5048707-5048385 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 178, 69 |
| Conread position: | 417-724 |
| Cow position: | chr3:63006767-63006466 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 37, 51 |
| Conread position: | 481-722 |
| Cow position: | chr3:30928031-30928274 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 489-721 |
| Cow position: | chr3:31899701-31899470 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 79, 90 |
| Conread position: | 492-733 |
| Cow position: | chr3:2910633-2910394 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 109, 40 |
| Conread position: | 510-707 |
| Cow position: | chr3:3805021-3805220 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 581-733 |
| Cow position: | chr3:24593616-24593464 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 79 |
Show alignments to all cow chromosomes.