Cow genome map
| Conread name: | Thy1-THY010036D02 |
| Conread position: | 346-724 |
| Cow position: | chrX:21598938-21599313 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 361-731 |
| Cow position: | chrX:35016087-35016445 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 361-733 |
| Cow position: | chrX:13050371-13050730 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 110, 121 |
| Conread position: | 362-476 |
| Cow position: | chrX:38322887-38322774 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 366-671 |
| Cow position: | chrX:21790929-21791211 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 204, 42 |
| Conread position: | 369-721 |
| Cow position: | chrX:31033684-31034022 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 110 |
| Conread position: | 373-576 |
| Cow position: | chrX:30004048-30003858 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 110 |
| Conread position: | 373-679 |
| Cow position: | chrX:29785015-29784705 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 85, 162 |
| Conread position: | 373-685 |
| Cow position: | chrX:22776318-22776624 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 85, 122 |
| Conread position: | 373-720 |
| Cow position: | chrX:30047818-30047483 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 195, 49 |
| Conread position: | 373-721 |
| Cow position: | chrX:25331372-25331703 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 89, 107 |
| Conread position: | 373-724 |
| Cow position: | chrX:24123798-24123462 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 89, 109 |
| Conread position: | 373-724 |
| Cow position: | chrX:27986019-27985680 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 40 |
| Conread position: | 373-730 |
| Cow position: | chrX:26898346-26898005 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 195, 15 |
| Conread position: | 373-731 |
| Cow position: | chrX:6277078-6276730 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 93, 89 |
| Conread position: | 373-731 |
| Cow position: | chrX:8907357-8907706 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 197, 86 |
| Conread position: | 373-731 |
| Cow position: | chrX:11670198-11669855 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 84, 15 |
| Conread position: | 373-732 |
| Cow position: | chrX:17672622-17672274 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 127 |
| Conread position: | 373-733 |
| Cow position: | chrX:22133722-22133370 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 374-724 |
| Cow position: | chrX:26503491-26503826 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 37 |
| Conread position: | 374-731 |
| Cow position: | chrX:21291179-21290829 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 117 |
| Conread position: | 382-724 |
| Cow position: | chrX:35015104-35015447 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 80, 140 |
| Conread position: | 383-721 |
| Cow position: | chrX:20802381-20802703 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 79, 28 |
| Conread position: | 388-731 |
| Cow position: | chrX:39716116-39716448 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 182, 53 |
| Conread position: | 398-720 |
| Cow position: | chrX:24138075-24137763 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 68, 64 |
| Conread position: | 401-730 |
| Cow position: | chrX:30991628-30991312 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 481-705 |
| Cow position: | chrX:6911369-6911144 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 146 |
| Conread position: | 489-724 |
| Cow position: | chrX:13008220-13007986 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 81, 90 |
| Conread position: | 490-724 |
| Cow position: | chrX:21634165-21633928 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 490-724 |
| Cow position: | chrX:35956287-35956044 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 491-724 |
| Cow position: | chrX:28605673-28605439 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 78, 188 |
| Conread position: | 493-704 |
| Cow position: | chrX:6362472-6362262 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 75, 166 |
| Conread position: | 512-733 |
| Cow position: | chrX:42451112-42450889 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 58, 11 |
Show alignments to all cow chromosomes.