Cow genome map
| Conread name: | Thy1-THY010038D02 |
| Conread position: | 2-230 |
| Cow position: | chr12:43054083-43053856 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 2-236 |
| Cow position: | chr12:18585072-18585313 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 2-248 |
| Cow position: | chr12:21430359-21430612 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:3363341-3363595 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 213 |
| Conread position: | 2-250 |
| Cow position: | chr12:3717874-3717619 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:11100644-11100899 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:12755759-12755504 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:12929487-12929231 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:17717697-17717952 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:21211071-21211326 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:21252181-21251928 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 2-250 |
| Cow position: | chr12:21944515-21944770 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:22747610-22747865 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 93, 174 |
| Conread position: | 2-250 |
| Cow position: | chr12:24993571-24993316 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:25266937-25266682 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:33926123-33925868 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:35548732-35548475 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:36212653-36212907 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 246 |
| Conread position: | 2-250 |
| Cow position: | chr12:38892758-38893013 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr12:42605780-42605525 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-249 |
| Cow position: | chr12:6078706-6078458 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 4-252 |
| Cow position: | chr12:2284401-2284656 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 133 |
| Conread position: | 5-250 |
| Cow position: | chr12:22203272-22203017 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-250 |
| Cow position: | chr12:1886939-1886701 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 84, 14 |
| Conread position: | 11-250 |
| Cow position: | chr12:8064447-8064216 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 11-250 |
| Cow position: | chr12:22571252-22571494 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 178 |
| Conread position: | 11-250 |
| Cow position: | chr12:27853542-27853295 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr12:42857121-42856876 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 84, 170 |
| Conread position: | 12-250 |
| Cow position: | chr12:3210388-3210641 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 28-230 |
| Cow position: | chr12:24432470-24432262 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 202 |
Show alignments to all cow chromosomes.