Cow genome map
| Conread name: | Thy1-THY010038D02 |
| Conread position: | 1-250 |
| Cow position: | chr13:51769496-51769745 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 89, 159 |
| Conread position: | 2-194 |
| Cow position: | chr13:61953426-61953625 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-198 |
| Cow position: | chr13:1142286-1142080 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 100, 82 |
| Conread position: | 2-219 |
| Cow position: | chr13:31509096-31509325 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 2-239 |
| Cow position: | chr13:33632931-33632703 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 46 |
| Conread position: | 2-249 |
| Cow position: | chr13:17310607-17310859 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:1883296-1883045 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:3555599-3555854 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:3692759-3692504 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:4486042-4486297 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:4733721-4733976 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:5260957-5261197 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 100, 118 |
| Conread position: | 2-250 |
| Cow position: | chr13:5516139-5515884 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:11389395-11389650 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:11737944-11738199 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:13327131-13327381 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 144 |
| Conread position: | 2-250 |
| Cow position: | chr13:15279602-15279349 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 162 |
| Conread position: | 2-250 |
| Cow position: | chr13:15559523-15559778 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:15922270-15922015 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:18122683-18122428 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:19230523-19230270 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 136 |
| Conread position: | 2-250 |
| Cow position: | chr13:19637334-19637588 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:31731375-31731127 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 93, 118 |
| Conread position: | 2-250 |
| Cow position: | chr13:32080052-32080307 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:32794893-32795146 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 93, 136 |
| Conread position: | 2-250 |
| Cow position: | chr13:32983210-32982955 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:33523768-33523513 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:35539353-35539609 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:36671843-36672099 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:41338471-41338220 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:43591464-43591717 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 2-250 |
| Cow position: | chr13:51006836-51006581 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr13:51466011-51465756 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-236 |
| Cow position: | chr13:47368356-47368599 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 99, 209 |
| Conread position: | 11-198 |
| Cow position: | chr13:679972-680166 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-248 |
| Cow position: | chr13:21401044-21401286 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 70 |
| Conread position: | 11-250 |
| Cow position: | chr13:5499790-5499544 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr13:33334151-33333905 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr13:50111666-50111912 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr13:60647384-60647142 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr13:60698602-60698359 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 84, 169 |
Show alignments to all cow chromosomes.