Cow genome map
| Conread name: | Thy1-THY010038D02 |
| Conread position: | 2-198 |
| Cow position: | chr17:6262142-6262345 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-218 |
| Cow position: | chr17:1705681-1705902 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 2-229 |
| Cow position: | chr17:15709711-15709477 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-236 |
| Cow position: | chr17:18100802-18100561 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-236 |
| Cow position: | chr17:20490591-20490837 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 2-248 |
| Cow position: | chr17:5044932-5044683 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 100, 147 |
| Conread position: | 2-249 |
| Cow position: | chr17:253099-253355 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-249 |
| Cow position: | chr17:22562427-22562681 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 2-250 |
| Cow position: | chr17:40584-40839 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr17:452114-452369 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr17:2176262-2176513 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 175 |
| Conread position: | 2-250 |
| Cow position: | chr17:2264467-2264722 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr17:3742442-3742697 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr17:5307457-5307202 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-250 |
| Cow position: | chr17:8204207-8204463 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-250 |
| Cow position: | chr17:13418682-13418932 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 210 |
| Conread position: | 2-250 |
| Cow position: | chr17:14214755-14214501 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 100, 213 |
| Conread position: | 2-250 |
| Cow position: | chr17:15853002-15853257 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 2-250 |
| Cow position: | chr17:16903164-16903419 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr17:19979846-19979593 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-250 |
| Cow position: | chr17:27792501-27792246 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 2-250 |
| Cow position: | chr17:29825683-29825433 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 93, 118 |
| Conread position: | 2-250 |
| Cow position: | chr17:38828197-38828448 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 212 |
| Conread position: | 3-199 |
| Cow position: | chr17:21420231-21420432 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 137 |
| Conread position: | 3-250 |
| Cow position: | chr17:43146292-43146036 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 9-236 |
| Cow position: | chr17:15327572-15327801 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 111 |
| Conread position: | 9-250 |
| Cow position: | chr17:2005380-2005617 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 237, 82 |
| Conread position: | 11-236 |
| Cow position: | chr17:22107355-22107123 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-238 |
| Cow position: | chr17:18197160-18197397 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 11-250 |
| Cow position: | chr17:147221-147467 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr17:8210942-8211189 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 14-237 |
| Cow position: | chr17:36815984-36816212 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 88, 162 |
| Conread position: | 32-235 |
| Cow position: | chr17:23721912-23722114 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 34-250 |
| Cow position: | chr17:18823381-18823598 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 114 |
Show alignments to all cow chromosomes.