Cow genome map
| Conread name: | Thy1-THY010038D02 |
| Conread position: | 1-250 |
| Cow position: | chr2:57337905-57338161 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-250 |
| Cow position: | chr2:72791628-72791372 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 2-198 |
| Cow position: | chr2:8732989-8733194 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-215 |
| Cow position: | chr2:32064102-32063882 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-221 |
| Cow position: | chr2:47183180-47182954 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-236 |
| Cow position: | chr2:31455388-31455611 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 112, 46 |
| Conread position: | 2-238 |
| Cow position: | chr2:58565771-58565539 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 60 |
| Conread position: | 2-240 |
| Cow position: | chr2:36982599-36982844 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-248 |
| Cow position: | chr2:1200871-1200617 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 100, 87 |
| Conread position: | 2-249 |
| Cow position: | chr2:2410859-2410605 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-249 |
| Cow position: | chr2:41047302-41047048 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:974426-974171 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:2182322-2182067 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:2210230-2209975 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:2214054-2213799 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:2456552-2456297 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:4181168-4180913 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:4401464-4401213 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:4452317-4452572 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:5996785-5997039 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 180 |
| Conread position: | 2-250 |
| Cow position: | chr2:6638683-6638428 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:8106374-8106629 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:8120650-8120906 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:9188116-9187861 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:9909940-9910195 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:12285160-12285416 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:12695725-12695478 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 93, 118 |
| Conread position: | 2-250 |
| Cow position: | chr2:14208885-14208633 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:16327965-16327710 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 90, 153 |
| Conread position: | 2-250 |
| Cow position: | chr2:19013307-19013559 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 217 |
| Conread position: | 2-250 |
| Cow position: | chr2:24687629-24687880 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:29217668-29217922 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:29967932-29968187 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:31408395-31408144 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 93, 118 |
| Conread position: | 2-250 |
| Cow position: | chr2:32457119-32456866 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 100, 214 |
| Conread position: | 2-250 |
| Cow position: | chr2:39423879-39424134 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:43757691-43757438 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:44093314-44093568 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:49629273-49629527 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 93, 230 |
| Conread position: | 2-250 |
| Cow position: | chr2:50061050-50060795 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:52498129-52497874 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:52620724-52620979 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:53331750-53332005 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:53541888-53542139 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:57053515-57053765 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 93, 224 |
| Conread position: | 2-250 |
| Cow position: | chr2:59411793-59411538 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:62730472-62730727 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:62999871-63000126 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:74469807-74470059 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr2:81414580-81414835 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-554 |
| Cow position: | chr2:12752981-12753540 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-219 |
| Cow position: | chr2:1285501-1285722 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 3-238 |
| Cow position: | chr2:43766027-43765786 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 96, 139 |
| Conread position: | 3-248 |
| Cow position: | chr2:5594567-5594800 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 91 |
| Conread position: | 3-250 |
| Cow position: | chr2:40455181-40455417 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-250 |
| Cow position: | chr2:46453821-46453578 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 57 |
| Conread position: | 5-250 |
| Cow position: | chr2:10184278-10184027 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 6-179 |
| Cow position: | chr2:13727812-13727630 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 6-250 |
| Cow position: | chr2:27291859-27291609 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 11-236 |
| Cow position: | chr2:280264-280032 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr2:851291-851046 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 11-250 |
| Cow position: | chr2:28795800-28796046 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr2:29106182-29106428 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr2:44477566-44477811 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 192 |
| Conread position: | 11-250 |
| Cow position: | chr2:50981195-50980949 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr2:54739443-54739685 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 12-197 |
| Cow position: | chr2:44197338-44197529 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 13-248 |
| Cow position: | chr2:6066064-6065833 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 89, 25 |
| Conread position: | 17-250 |
| Cow position: | chr2:3839233-3839470 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 17, 224 |
| Conread position: | 27-250 |
| Cow position: | chr2:63289949-63289725 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 106 |
Show alignments to all cow chromosomes.