Cow genome map
| Conread name: | Thy1-THY010038D02 |
| Conread position: | 1-250 |
| Cow position: | chr29:21226393-21226645 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 2-221 |
| Cow position: | chr29:15260576-15260350 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 2-238 |
| Cow position: | chr29:16037000-16036757 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 215 |
| Conread position: | 2-238 |
| Cow position: | chr29:45206925-45207167 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 2-248 |
| Cow position: | chr29:39424725-39424477 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 183 |
| Conread position: | 2-249 |
| Cow position: | chr29:2102259-2102514 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-249 |
| Cow position: | chr29:32804932-32805181 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 2-250 |
| Cow position: | chr29:666994-666739 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:1477865-1478120 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:2838923-2838668 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:5785226-5785481 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:7846808-7847059 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:8624779-8624528 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:14209135-14208881 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 93, 187 |
| Conread position: | 2-250 |
| Cow position: | chr29:15624285-15624030 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:15967140-15966885 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:19525876-19525621 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:19656317-19656572 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:21430440-21430189 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 93, 118 |
| Conread position: | 2-250 |
| Cow position: | chr29:25930103-25929851 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 93, 159 |
| Conread position: | 2-250 |
| Cow position: | chr29:27977407-27977158 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 117, 98 |
| Conread position: | 2-250 |
| Cow position: | chr29:31095174-31094918 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:32514741-32514993 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:35299333-35299588 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-250 |
| Cow position: | chr29:39077301-39077048 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 93, 139 |
| Conread position: | 2-250 |
| Cow position: | chr29:42256561-42256310 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 93, 118 |
| Conread position: | 5-250 |
| Cow position: | chr29:131938-132187 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 90, 168 |
| Conread position: | 11-236 |
| Cow position: | chr29:6263578-6263349 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 195 |
| Conread position: | 11-236 |
| Cow position: | chr29:19620844-19620614 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 127 |
| Conread position: | 11-250 |
| Cow position: | chr29:46037-45792 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 11-250 |
| Cow position: | chr29:529976-529731 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 165 |
| Conread position: | 11-250 |
| Cow position: | chr29:608206-607965 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr29:1217148-1217394 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 11-250 |
| Cow position: | chr29:2692872-2693114 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr29:5239815-5240060 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 84, 154 |
| Conread position: | 11-250 |
| Cow position: | chr29:13922929-13923175 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr29:19889999-19890241 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-250 |
| Cow position: | chr29:23979133-23979379 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 12-236 |
| Cow position: | chr29:10644988-10644757 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 27-250 |
| Cow position: | chr29:34122306-34122081 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 100 |
| Conread position: | 32-221 |
| Cow position: | chr29:21254423-21254618 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 6 |
| Conread position: | 49-250 |
| Cow position: | chr29:2299852-2299647 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 57-236 |
| Cow position: | chr29:800194-800016 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 40 |
Show alignments to all cow chromosomes.