Cow genome map


           Conread name:
           Thy1-THY010043D03
        

               Conread position:
               1-352
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               130, 9
               

               Conread position:
               3-309
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               158, 91
               

               Conread position:
               8-355
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               123, 83
               

               Conread position:
               13-288
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               72, 88
               

               Conread position:
               14-353
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               20-355
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               57, 81
               

               Conread position:
               27-321
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               30-348
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               94, 64
               

               Conread position:
               31-353
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               103, 63
               

               Conread position:
               354-628
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               354-658
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               26, 151
               

               Conread position:
               354-671
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               356-632
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 5
               

               Conread position:
               357-567
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               357-594
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               357-628
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               357-629
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 116
               

               Conread position:
               357-646
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               357-657
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               23, 123
               

               Conread position:
               357-658
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 254
               

               Conread position:
               357-661
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               357-662
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               180, 44
               

               Conread position:
               357-664
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 89
               

               Conread position:
               357-664
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 68
               

               Conread position:
               357-671
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               357-671
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 249
               

               Conread position:
               357-672
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               25, 60
               

               Conread position:
               357-672
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               357-672
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               25, 246
               

               Conread position:
               357-672
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               357-672
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 246
               

               Conread position:
               357-672
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               30, 79
               

               Conread position:
               358-603
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               358-661
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               166, 22
               

               Conread position:
               358-661
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               29, 120
               

               Conread position:
               358-667
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               24, 244
               

               Conread position:
               361-662
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               361-667
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               361-667
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               361-672
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               150, 43
               

               Conread position:
               362-587
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               363-615
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               19, 115
               

               Conread position:
               365-555
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               367-644
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               369-672
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               38, 90
               

               Conread position:
               371-666
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               379-628
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               133, 226
               

               Conread position:
               379-671
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               125, 20
               

               Conread position:
               380-671
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               140, 217
               

               Conread position:
               384-671
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 116
               

               Conread position:
               402-635
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 209
               

               Conread position:
               402-671
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               402-671
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               403-672
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               139, 42
               

               Conread position:
               409-672
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               410-671
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               106, 18
               

               Conread position:
               437-672
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               7, 169
               

               Conread position:
               457-664
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               71, 169
               
Show alignments to all cow chromosomes.