Cow genome map
| Conread name: | Thy1-THY010043D03 |
| Conread position: | 1-284 |
| Cow position: | chr11:19238259-19238535 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 158, 11 |
| Conread position: | 1-307 |
| Cow position: | chr11:24967356-24967065 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 96 |
| Conread position: | 1-355 |
| Cow position: | chr11:35881812-35881462 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 1-355 |
| Cow position: | chr11:35919873-35920221 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 3-347 |
| Cow position: | chr11:50134251-50134595 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 15-355 |
| Cow position: | chr11:9971086-9971399 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 71 |
| Conread position: | 17-355 |
| Cow position: | chr11:23138180-23138517 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 18-355 |
| Cow position: | chr11:58400144-58399829 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 31-288 |
| Cow position: | chr11:77745387-77745646 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 31-355 |
| Cow position: | chr11:35506742-35506430 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 103, 61 |
| Conread position: | 172-357 |
| Cow position: | chr11:8413525-8413341 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 16, 149 |
| Conread position: | 357-631 |
| Cow position: | chr11:73467324-73467043 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 213 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 29, 127 |
| Conread position: | 357-671 |
| Cow position: | chr11:26122827-26122511 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 246 |
| Conread position: | 357-671 |
| Cow position: | chr11:60757870-60757557 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 357-672 |
| Cow position: | chr11:15987347-15987664 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 246 |
| Conread position: | 357-672 |
| Cow position: | chr11:31749549-31749253 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 23, 115 |
| Conread position: | 357-672 |
| Cow position: | chr11:46778397-46778092 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 155, 34 |
| Conread position: | 357-672 |
| Cow position: | chr11:63391385-63391065 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-672 |
| Cow position: | chr11:67864179-67863864 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 357-672 |
| Cow position: | chr11:84966208-84966525 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 246 |
| Conread position: | 358-603 |
| Cow position: | chr11:12176514-12176772 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 358-624 |
| Cow position: | chr11:22725769-22726038 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 358-659 |
| Cow position: | chr11:27834653-27834357 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 361-646 |
| Cow position: | chr11:9249132-9248850 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 25, 125 |
| Conread position: | 361-658 |
| Cow position: | chr11:74346500-74346802 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 367-670 |
| Cow position: | chr11:35143218-35142913 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 236 |
| Conread position: | 373-624 |
| Cow position: | chr11:44232553-44232809 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 147, 139 |
| Conread position: | 376-617 |
| Cow position: | chr11:41600790-41600549 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 153, 222 |
| Conread position: | 420-664 |
| Cow position: | chr11:10129585-10129346 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 126, 139 |
| Conread position: | 422-639 |
| Cow position: | chr11:85731858-85731629 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 90, 211 |
| Conread position: | 422-671 |
| Cow position: | chr11:27659406-27659662 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 185 |
| Conread position: | 432-670 |
| Cow position: | chr11:59600783-59601020 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 87, 117 |
Show alignments to all cow chromosomes.