Cow genome map
| Conread name: | Thy1-THY010043D03 |
| Conread position: | 1-299 |
| Cow position: | chr13:21275921-21276216 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 1-318 |
| Cow position: | chr13:563077-562758 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 10, 148 |
| Conread position: | 1-355 |
| Cow position: | chr13:21402730-21402382 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 97 |
| Conread position: | 1-358 |
| Cow position: | chr13:11290750-11290400 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 23-353 |
| Cow position: | chr13:25883135-25882814 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 73, 143 |
| Conread position: | 29-355 |
| Cow position: | chr13:1155611-1155300 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 29-355 |
| Cow position: | chr13:25531691-25531382 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 357-597 |
| Cow position: | chr13:5230779-5230534 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 194 |
| Conread position: | 357-628 |
| Cow position: | chr13:49613367-49613094 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 357-652 |
| Cow position: | chr13:30036112-30035823 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 54 |
| Conread position: | 357-667 |
| Cow position: | chr13:33523790-33523473 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 30, 262 |
| Conread position: | 357-667 |
| Cow position: | chr13:50111635-50111949 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-671 |
| Cow position: | chr13:4943551-4943871 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-671 |
| Cow position: | chr13:19637312-19637631 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 132 |
| Conread position: | 357-671 |
| Cow position: | chr13:41338493-41338179 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 246 |
| Conread position: | 357-672 |
| Cow position: | chr13:13327109-13327425 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 245 |
| Conread position: | 357-672 |
| Cow position: | chr13:18122705-18122384 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-672 |
| Cow position: | chr13:21401007-21401332 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 357-672 |
| Cow position: | chr13:23455605-23455924 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-672 |
| Cow position: | chr13:24932627-24932306 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-672 |
| Cow position: | chr13:34509644-34509329 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 23, 244 |
| Conread position: | 358-629 |
| Cow position: | chr13:15279623-15279346 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 24, 247 |
| Conread position: | 358-672 |
| Cow position: | chr13:11255878-11255568 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 359-672 |
| Cow position: | chr13:35539333-35539653 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 249 |
| Conread position: | 361-662 |
| Cow position: | chr13:1883314-1883011 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 361-669 |
| Cow position: | chr13:53543992-53543692 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 403-661 |
| Cow position: | chr13:39042147-39041881 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 403-662 |
| Cow position: | chr13:47536327-47536583 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 409-664 |
| Cow position: | chr13:57026090-57026342 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 416-632 |
| Cow position: | chr13:32536688-32536466 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 433-672 |
| Cow position: | chr13:11289513-11289744 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 445-672 |
| Cow position: | chr13:22080903-22080677 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 62, 153 |
| Conread position: | 451-672 |
| Cow position: | chr13:32776808-32776585 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 531-669 |
| Cow position: | chr13:46489588-46489453 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 67 |
Show alignments to all cow chromosomes.