Cow genome map
| Conread name: | Thy1-THY010043D03 |
| Conread position: | 1-353 |
| Cow position: | chr14:21018240-21018581 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 4-313 |
| Cow position: | chr14:12484171-12483879 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 30-355 |
| Cow position: | chr14:35651050-35650736 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 32-351 |
| Cow position: | chr14:35360357-35360669 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 348-672 |
| Cow position: | chr14:49218368-49218689 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 164, 57 |
| Conread position: | 357-564 |
| Cow position: | chr14:38434923-38435132 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 173 |
| Conread position: | 357-616 |
| Cow position: | chr14:20563701-20563444 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 357-618 |
| Cow position: | chr14:36345388-36345133 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 357-671 |
| Cow position: | chr14:5531375-5531695 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 29, 250 |
| Conread position: | 357-671 |
| Cow position: | chr14:13781901-13782217 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 357-672 |
| Cow position: | chr14:2288296-2288617 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-672 |
| Cow position: | chr14:24993084-24992777 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 358-672 |
| Cow position: | chr14:11835672-11835993 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 22, 146 |
| Conread position: | 378-672 |
| Cow position: | chr14:44583313-44583600 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 379-672 |
| Cow position: | chr14:41766154-41766433 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 380-663 |
| Cow position: | chr14:48401771-48401501 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 383-672 |
| Cow position: | chr14:47602246-47602540 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 127, 43 |
| Conread position: | 384-670 |
| Cow position: | chr14:26868244-26867950 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 255 |
| Conread position: | 384-672 |
| Cow position: | chr14:47644447-47644735 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 125, 86 |
| Conread position: | 394-663 |
| Cow position: | chr14:34054047-34054305 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 409-662 |
| Cow position: | chr14:27989393-27989136 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 409-669 |
| Cow position: | chr14:25817328-25817573 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 96 |
| Conread position: | 410-671 |
| Cow position: | chr14:12612091-12612353 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 124, 175 |
| Conread position: | 417-671 |
| Cow position: | chr14:46301998-46302261 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 32, 192 |
| Conread position: | 417-672 |
| Cow position: | chr14:34999258-34999509 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 418-668 |
| Cow position: | chr14:48706331-48706582 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 50 |
| Conread position: | 423-661 |
| Cow position: | chr14:39299854-39300095 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 82, 182 |
| Conread position: | 424-655 |
| Cow position: | chr14:17763281-17763048 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 104, 179 |
Show alignments to all cow chromosomes.