Cow genome map
| Conread name: | Thy1-THY010043D03 |
| Conread position: | 9-326 |
| Cow position: | chr16:23025253-23024934 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 89 |
| Conread position: | 15-277 |
| Cow position: | chr16:48607169-48607425 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 18-355 |
| Cow position: | chr16:11099898-11100217 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 116, 79 |
| Conread position: | 20-296 |
| Cow position: | chr16:4144961-4144688 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 113, 74 |
| Conread position: | 26-358 |
| Cow position: | chr16:30290207-30289889 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 27-358 |
| Cow position: | chr16:43275912-43275591 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 67 |
| Conread position: | 67-355 |
| Cow position: | chr16:16963656-16963382 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 8 |
| Conread position: | 187-353 |
| Cow position: | chr16:2396073-2395915 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 354-632 |
| Cow position: | chr16:25955866-25955599 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 357-616 |
| Cow position: | chr16:36240848-36241107 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 145 |
| Conread position: | 357-640 |
| Cow position: | chr16:10966517-10966232 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 357-650 |
| Cow position: | chr16:20408473-20408186 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 176, 52 |
| Conread position: | 357-671 |
| Cow position: | chr16:1565979-1565665 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 357-671 |
| Cow position: | chr16:3144700-3144387 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 23 |
| Conread position: | 357-671 |
| Cow position: | chr16:3149332-3149019 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 23 |
| Conread position: | 357-671 |
| Cow position: | chr16:15186761-15187078 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 248 |
| Conread position: | 357-671 |
| Cow position: | chr16:15411356-15411041 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 240 |
| Conread position: | 357-671 |
| Cow position: | chr16:20635821-20635507 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 245 |
| Conread position: | 357-671 |
| Cow position: | chr16:25343668-25343987 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-671 |
| Cow position: | chr16:28023328-28023015 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 155, 58 |
| Conread position: | 357-672 |
| Cow position: | chr16:5526410-5526093 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 246 |
| Conread position: | 357-672 |
| Cow position: | chr16:20642201-20642515 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 115 |
| Conread position: | 358-661 |
| Cow position: | chr16:24811651-24811960 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 247 |
| Conread position: | 358-668 |
| Cow position: | chr16:5633613-5633307 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 358-671 |
| Cow position: | chr16:10439944-10440252 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 358-672 |
| Cow position: | chr16:34207583-34207897 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 22, 124 |
| Conread position: | 359-672 |
| Cow position: | chr16:9416992-9416680 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 120 |
| Conread position: | 361-617 |
| Cow position: | chr16:9024249-9024519 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 256 |
| Conread position: | 361-667 |
| Cow position: | chr16:46055743-46056048 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 361-672 |
| Cow position: | chr16:26991253-26990935 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 21, 247 |
| Conread position: | 362-661 |
| Cow position: | chr16:18617432-18617136 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 363-672 |
| Cow position: | chr16:48103793-48104103 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 379-672 |
| Cow position: | chr16:23800911-23800621 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 133, 36 |
| Conread position: | 406-604 |
| Cow position: | chr16:23064254-23064047 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 91 |
| Conread position: | 417-672 |
| Cow position: | chr16:25262382-25262636 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 448-672 |
| Cow position: | chr16:48909848-48909626 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 14 |
Show alignments to all cow chromosomes.