Cow genome map

Conread name: Thy1-THY010043D03

Conread position: 1-355
Cow position: chr2:31264569-31264932 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 133, 93

Conread position: 1-355
Cow position: chr2:39855705-39855361 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 8, 73

Conread position: 2-353
Cow position: chr2:76822333-76822689 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 93

Conread position: 8-353
Cow position: chr2:17341483-17341152 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 13-329
Cow position: chr2:26879318-26878998 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 215
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 81

Conread position: 18-293
Cow position: chr2:76340759-76341034 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 76

Conread position: 26-317
Cow position: chr2:31155608-31155312 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 102, 68

Conread position: 31-293
Cow position: chr2:29291654-29291910 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 63

Conread position: 31-349
Cow position: chr2:70746684-70746365 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 66

Conread position: 172-355
Cow position: chr2:5596861-5596680 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 68

Conread position: 354-667
Cow position: chr2:31455359-31455664 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 26, 82

Conread position: 355-639
Cow position: chr2:37452145-37451871 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 78

Conread position: 357-519
Cow position: chr2:52064684-52064848 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 357-576
Cow position: chr2:3833585-3833362 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 53

Conread position: 357-655
Cow position: chr2:12285138-12285443 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 251

Conread position: 357-657
Cow position: chr2:56800517-56800224 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 184, 23

Conread position: 357-662
Cow position: chr2:16332837-16333144 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 23

Conread position: 357-670
Cow position: chr2:906185-906497 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 107

Conread position: 357-671
Cow position: chr2:13068076-13067759 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 247

Conread position: 357-671
Cow position: chr2:36982577-36982899 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 253

Conread position: 357-671
Cow position: chr2:42668778-42668462 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 246

Conread position: 357-671
Cow position: chr2:50079487-50079807 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 250

Conread position: 357-671
Cow position: chr2:74469785-74470100 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 247

Conread position: 357-672
Cow position: chr2:3622452-3622767 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 60

Conread position: 357-672
Cow position: chr2:4401486-4401169 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 246

Conread position: 357-672
Cow position: chr2:4452295-4452616 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 250

Conread position: 357-672
Cow position: chr2:6004909-6004588 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 250

Conread position: 357-672
Cow position: chr2:6290841-6291159 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 23, 75

Conread position: 357-672
Cow position: chr2:9957142-9956825 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 246

Conread position: 357-672
Cow position: chr2:9963142-9962825 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 246

Conread position: 357-672
Cow position: chr2:24687607-24687924 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 246

Conread position: 357-672
Cow position: chr2:54739412-54739729 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 246

Conread position: 358-592
Cow position: chr2:1285479-1285722 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 358-648
Cow position: chr2:22134744-22134449 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 63

Conread position: 358-672
Cow position: chr2:20890903-20890598 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 22, 167

Conread position: 358-672
Cow position: chr2:43106256-43106577 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 250

Conread position: 359-671
Cow position: chr2:12594904-12595222 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 80

Conread position: 359-671
Cow position: chr2:21982827-21982513 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 244

Conread position: 359-672
Cow position: chr2:53541868-53542183 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 244

Conread position: 361-671
Cow position: chr2:1433923-1433617 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 157

Conread position: 362-658
Cow position: chr2:26908675-26908974 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 79

Conread position: 363-672
Cow position: chr2:5594550-5594845 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 80

Conread position: 365-670
Cow position: chr2:11500916-11501223 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 17, 240

Conread position: 384-672
Cow position: chr2:27291856-27291568 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 76, 87

Conread position: 385-672
Cow position: chr2:58473686-58473394 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 211

Conread position: 386-658
Cow position: chr2:15750275-15750535 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 392-644
Cow position: chr2:3839233-3839489 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 212

Conread position: 401-662
Cow position: chr2:25931432-25931176 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 147, 92

Conread position: 409-657
Cow position: chr2:50417344-50417581 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 409-662
Cow position: chr2:34618990-34619232 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 103, 27

Conread position: 409-668
Cow position: chr2:35357991-35358253 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 196

Conread position: 419-672
Cow position: chr2:39115793-39116047 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 187

Conread position: 424-642
Cow position: chr2:4724979-4725202 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 10

Conread position: 438-672
Cow position: chr2:29957052-29956821 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 109

Conread position: 443-667
Cow position: chr2:34500073-34500289 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 63

Show alignments to all cow chromosomes.