Cow genome map
| Conread name: | Thy1-THY010043D03 |
| Conread position: | 1-281 |
| Cow position: | chr4:23646934-23647206 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 1-355 |
| Cow position: | chr4:2610144-2609809 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 142, 92 |
| Conread position: | 1-355 |
| Cow position: | chr4:5623288-5623629 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 7-355 |
| Cow position: | chr4:3440310-3439960 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 13-355 |
| Cow position: | chr4:2244089-2244426 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 277, 81 |
| Conread position: | 16-355 |
| Cow position: | chr4:41301096-41301445 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 18-292 |
| Cow position: | chr4:29813650-29813908 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 122, 76 |
| Conread position: | 26-351 |
| Cow position: | chr4:23494816-23494483 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 30-355 |
| Cow position: | chr4:37620008-37620323 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 64 |
| Conread position: | 172-351 |
| Cow position: | chr4:11389834-11390010 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 357-662 |
| Cow position: | chr4:6445446-6445135 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 357-662 |
| Cow position: | chr4:47927929-47928226 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 357-671 |
| Cow position: | chr4:3069043-3069352 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 227 |
| Conread position: | 357-671 |
| Cow position: | chr4:26546656-26546968 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 30, 75 |
| Conread position: | 357-671 |
| Cow position: | chr4:61241395-61241712 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 247 |
| Conread position: | 357-671 |
| Cow position: | chr4:67382400-67382717 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 23 |
| Conread position: | 357-672 |
| Cow position: | chr4:21361645-21361955 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 357-672 |
| Cow position: | chr4:21573877-21574193 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 216 |
| Conread position: | 357-672 |
| Cow position: | chr4:41956877-41957194 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 246 |
| Conread position: | 358-672 |
| Cow position: | chr4:10542334-10542014 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 358-672 |
| Cow position: | chr4:60626401-60626088 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 154, 8 |
| Conread position: | 359-670 |
| Cow position: | chr4:33495674-33495990 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 359-672 |
| Cow position: | chr4:22026311-22025992 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 359-672 |
| Cow position: | chr4:41961015-41961329 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 244 |
| Conread position: | 360-586 |
| Cow position: | chr4:17234161-17234393 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 22, 219 |
| Conread position: | 361-628 |
| Cow position: | chr4:17476580-17476833 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 361-630 |
| Cow position: | chr4:45655050-45654776 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 361-672 |
| Cow position: | chr4:11391365-11391052 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 151, 48 |
| Conread position: | 361-672 |
| Cow position: | chr4:60044938-60044618 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 19, 174 |
| Conread position: | 365-657 |
| Cow position: | chr4:12454175-12454472 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 365-657 |
| Cow position: | chr4:13253886-13254170 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 365-662 |
| Cow position: | chr4:68942464-68942172 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 366-629 |
| Cow position: | chr4:21973532-21973269 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 386-672 |
| Cow position: | chr4:51606632-51606342 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 220 |
| Conread position: | 387-649 |
| Cow position: | chr4:61711253-61710994 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 38 |
Show alignments to all cow chromosomes.