Cow genome map


           Conread name:
           Thy1-THY010043D03
        

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               10, 130
               

               Conread position:
               20-355
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               27-355
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               107, 70
               

               Conread position:
               29-672
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               221
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               499, 572
               

               Conread position:
               187-313
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               354-672
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 43
               

               Conread position:
               354-672
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               355-632
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               357-522
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               357-542
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               357-594
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               357-646
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               23, 157
               

               Conread position:
               357-662
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               19, 178
               

               Conread position:
               357-667
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               26, 157
               

               Conread position:
               357-668
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 69
               

               Conread position:
               357-670
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               28, 173
               

               Conread position:
               357-671
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               27, 54
               

               Conread position:
               357-671
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               234
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               357-671
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 250
               

               Conread position:
               358-672
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 52
               

               Conread position:
               359-662
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 248
               

               Conread position:
               361-613
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 244
               

               Conread position:
               361-664
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               19, 155
               

               Conread position:
               361-672
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               362-649
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 245
               

               Conread position:
               372-672
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               385-662
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               121, 144
               

               Conread position:
               393-635
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               396-662
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               116, 84
               

               Conread position:
               407-672
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               103, 193
               

               Conread position:
               415-672
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               89, 190
               

               Conread position:
               416-671
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               96, 66
               

               Conread position:
               417-658
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               110, 184
               

               Conread position:
               422-668
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               99, 183
               

               Conread position:
               471-672
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 79
               
Show alignments to all cow chromosomes.