Cow genome map
| Conread name: | Thy1-THY010043D03 |
| Conread position: | 2-269 |
| Cow position: | chr6:58316001-58315742 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 152, 92 |
| Conread position: | 3-349 |
| Cow position: | chr6:25784265-25783930 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 9-352 |
| Cow position: | chr6:54357428-54357761 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 123, 14 |
| Conread position: | 13-355 |
| Cow position: | chr6:5500845-5501179 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 15-293 |
| Cow position: | chr6:32858842-32858568 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 26-353 |
| Cow position: | chr6:33984899-33984565 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 172-313 |
| Cow position: | chr6:66874119-66873979 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 305-671 |
| Cow position: | chr6:55901541-55901915 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 262 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 357-628 |
| Cow position: | chr6:7138982-7138706 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 25, 246 |
| Conread position: | 357-628 |
| Cow position: | chr6:51091713-51092000 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 25, 257 |
| Conread position: | 357-644 |
| Cow position: | chr6:14927810-14928108 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-662 |
| Cow position: | chr6:66547810-66548120 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 32, 125 |
| Conread position: | 357-671 |
| Cow position: | chr6:27527637-27527317 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-671 |
| Cow position: | chr6:51716895-51717215 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-672 |
| Cow position: | chr6:5750281-5750602 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-672 |
| Cow position: | chr6:25361642-25361960 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 357-672 |
| Cow position: | chr6:55238044-55238365 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-672 |
| Cow position: | chr6:58952758-58952450 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 361-632 |
| Cow position: | chr6:16624188-16624450 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 361-632 |
| Cow position: | chr6:51025352-51025621 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 361-658 |
| Cow position: | chr6:9757267-9756958 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 79 |
| Conread position: | 377-672 |
| Cow position: | chr6:66838490-66838782 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 132, 44 |
| Conread position: | 406-591 |
| Cow position: | chr6:32677527-32677334 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 409-662 |
| Cow position: | chr6:18572619-18572363 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 201 |
| Conread position: | 433-671 |
| Cow position: | chr6:60875725-60875967 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 79, 172 |
| Conread position: | 455-662 |
| Cow position: | chr6:22931405-22931195 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 65, 97 |
Show alignments to all cow chromosomes.