Cow genome map


           Conread name:
           Thy1-THY010043D03
        

               Conread position:
               1-279
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               1-354
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 140
               

               Conread position:
               1-355
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               169, 12
               

               Conread position:
               1-355
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               76, 11
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 96
               

               Conread position:
               12-346
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 82
               

               Conread position:
               25-355
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               12, 71
               

               Conread position:
               25-360
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               100, 69
               

               Conread position:
               30-355
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               201, 70
               

               Conread position:
               30-355
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 95
               

               Conread position:
               38-357
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               66, 38
               

               Conread position:
               93-353
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               344-672
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               354-617
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               355-613
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               357-594
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               357-598
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               357-653
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               23, 240
               

               Conread position:
               357-663
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 114
               

               Conread position:
               357-671
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 197
               

               Conread position:
               357-671
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               25, 251
               

               Conread position:
               357-671
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               31, 58
               

               Conread position:
               357-672
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               25, 222
               

               Conread position:
               357-672
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               25, 157
               

               Conread position:
               357-672
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 46
               

               Conread position:
               360-671
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               361-628
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               26, 248
               

               Conread position:
               361-664
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               21, 246
               

               Conread position:
               361-671
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               19, 245
               

               Conread position:
               361-672
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               365-602
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               21, 127
               

               Conread position:
               366-603
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 43
               

               Conread position:
               377-670
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               135, 188
               

               Conread position:
               381-631
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               387-624
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               417-672
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               420-672
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               110, 54
               
Show alignments to all cow chromosomes.