Cow genome map
| Conread name: | Thy1-THY010043D03 |
| Conread position: | 1-261 |
| Cow position: | chr8:37007988-37008243 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 133, 9 |
| Conread position: | 1-353 |
| Cow position: | chr8:20673847-20674205 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 87, 95 |
| Conread position: | 1-355 |
| Cow position: | chr8:24237682-24237336 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 93 |
| Conread position: | 1-355 |
| Cow position: | chr8:50708982-50708636 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 11, 155 |
| Conread position: | 2-355 |
| Cow position: | chr8:33585088-33584726 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 3-317 |
| Cow position: | chr8:11974696-11974390 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 160, 22 |
| Conread position: | 8-351 |
| Cow position: | chr8:22103261-22103597 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 102, 84 |
| Conread position: | 11-355 |
| Cow position: | chr8:25083186-25082853 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 123, 81 |
| Conread position: | 24-355 |
| Cow position: | chr8:31289061-31289398 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 101, 70 |
| Conread position: | 26-355 |
| Cow position: | chr8:43980936-43981254 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 30-355 |
| Cow position: | chr8:1834819-1834490 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 101, 70 |
| Conread position: | 32-355 |
| Cow position: | chr8:1303801-1303499 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 62 |
| Conread position: | 38-334 |
| Cow position: | chr8:59061561-59061275 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 96, 56 |
| Conread position: | 357-531 |
| Cow position: | chr8:24913659-24913483 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 357-624 |
| Cow position: | chr8:5019639-5019914 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 249 |
| Conread position: | 357-644 |
| Cow position: | chr8:32649329-32649617 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 160 |
| Conread position: | 357-662 |
| Cow position: | chr8:1346331-1346027 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 231 |
| Conread position: | 357-664 |
| Cow position: | chr8:19193149-19193448 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 186, 71 |
| Conread position: | 357-671 |
| Cow position: | chr8:53433856-53434161 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 357-672 |
| Cow position: | chr8:3955672-3955986 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 134 |
| Conread position: | 357-672 |
| Cow position: | chr8:24230058-24230379 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 249 |
| Conread position: | 358-629 |
| Cow position: | chr8:18684658-18684382 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 246 |
| Conread position: | 358-635 |
| Cow position: | chr8:18484391-18484679 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 358-658 |
| Cow position: | chr8:46216981-46216668 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 28, 148 |
| Conread position: | 358-672 |
| Cow position: | chr8:55084374-55084684 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 150 |
| Conread position: | 359-662 |
| Cow position: | chr8:14589242-14588937 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 244 |
| Conread position: | 359-662 |
| Cow position: | chr8:27536230-27535926 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 153, 21 |
| Conread position: | 359-672 |
| Cow position: | chr8:1501652-1501336 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 23, 103 |
| Conread position: | 360-644 |
| Cow position: | chr8:39579973-39580263 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 18, 244 |
| Conread position: | 361-596 |
| Cow position: | chr8:9669835-9670083 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 361-638 |
| Cow position: | chr8:24888550-24888817 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 361-650 |
| Cow position: | chr8:32302624-32302917 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 361-667 |
| Cow position: | chr8:20675926-20675620 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 361-672 |
| Cow position: | chr8:58855319-58855629 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 229 |
| Conread position: | 363-531 |
| Cow position: | chr8:61668732-61668903 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 364-518 |
| Cow position: | chr8:18578116-18577965 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 365-672 |
| Cow position: | chr8:41970426-41970114 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 241 |
| Conread position: | 366-663 |
| Cow position: | chr8:16025627-16025324 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 377-665 |
| Cow position: | chr8:34406191-34406483 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 233 |
| Conread position: | 380-616 |
| Cow position: | chr8:47066853-47066610 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 123, 225 |
| Conread position: | 384-667 |
| Cow position: | chr8:55302571-55302847 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 221, 144 |
| Conread position: | 385-667 |
| Cow position: | chr8:33691652-33691934 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 154, 219 |
| Conread position: | 414-671 |
| Cow position: | chr8:18658068-18657805 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 193 |
| Conread position: | 415-631 |
| Cow position: | chr8:9994166-9994378 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 122, 15 |
| Conread position: | 424-671 |
| Cow position: | chr8:38528227-38528473 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 123 |
| Conread position: | 452-654 |
| Cow position: | chr8:21233763-21233972 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 22 |
Show alignments to all cow chromosomes.