Cow genome map
| Conread name: | Thy1-THY010043D03 |
| Conread position: | 1-312 |
| Cow position: | chrX:34401944-34401637 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 151 |
| Conread position: | 1-355 |
| Cow position: | chrX:14908962-14908615 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 2-355 |
| Cow position: | chrX:4629740-4630096 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 8-268 |
| Cow position: | chrX:30162932-30162680 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 89 |
| Conread position: | 21-278 |
| Cow position: | chrX:25338106-25337850 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 79 |
| Conread position: | 26-353 |
| Cow position: | chrX:36840794-36840467 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 27-313 |
| Cow position: | chrX:23970301-23969996 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 105 |
| Conread position: | 28-355 |
| Cow position: | chrX:19228147-19228476 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 108, 32 |
| Conread position: | 177-301 |
| Cow position: | chrX:22821786-22821663 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 182-355 |
| Cow position: | chrX:21815937-21815767 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 188-672 |
| Cow position: | chrX:28929624-28929149 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 141 |
| Conread position: | 357-657 |
| Cow position: | chrX:731368-731067 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 250 |
| Conread position: | 357-664 |
| Cow position: | chrX:42008819-42009130 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 27, 86 |
| Conread position: | 357-670 |
| Cow position: | chrX:20741440-20741122 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 107 |
| Conread position: | 357-671 |
| Cow position: | chrX:3407145-3406830 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 357-671 |
| Cow position: | chrX:16701871-16702190 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 357-671 |
| Cow position: | chrX:21492355-21492676 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 25, 251 |
| Conread position: | 357-672 |
| Cow position: | chrX:7119679-7120002 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 358-594 |
| Cow position: | chrX:16360919-16360672 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 358-672 |
| Cow position: | chrX:3427326-3427618 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 359-672 |
| Cow position: | chrX:9067164-9067476 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 110, 21 |
| Conread position: | 361-619 |
| Cow position: | chrX:387329-387599 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 361-671 |
| Cow position: | chrX:13416236-13415920 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 31, 87 |
| Conread position: | 366-672 |
| Cow position: | chrX:34007980-34008293 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 14, 242 |
| Conread position: | 379-670 |
| Cow position: | chrX:39565068-39564786 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 380-598 |
| Cow position: | chrX:35938812-35938581 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 380-672 |
| Cow position: | chrX:3466146-3465854 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 148, 208 |
| Conread position: | 385-663 |
| Cow position: | chrX:10413742-10413465 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 121, 215 |
| Conread position: | 401-669 |
| Cow position: | chrX:29765251-29765513 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 148, 61 |
| Conread position: | 412-648 |
| Cow position: | chrX:15992560-15992798 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 100, 8 |
| Conread position: | 416-672 |
| Cow position: | chrX:22331525-22331263 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 86, 192 |
| Conread position: | 424-664 |
| Cow position: | chrX:9403434-9403196 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 89, 77 |
| Conread position: | 424-672 |
| Cow position: | chrX:672732-672484 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 104, 177 |
| Conread position: | 436-672 |
| Cow position: | chrX:16085897-16086133 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 92, 165 |
| Conread position: | 445-672 |
| Cow position: | chrX:11743568-11743797 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 81 |
Show alignments to all cow chromosomes.