Cow genome map
| Conread name: | Thy1-THY010060E08 |
| Conread position: | 602-839 |
| Cow position: | chr14:45087143-45087386 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr14:191991-192237 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 602-842 |
| Cow position: | chr14:5531276-5531521 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr14:7988454-7988699 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr14:11475351-11475109 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr14:19326321-19326074 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr14:23255403-23255157 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr14:34668852-34668603 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 602-842 |
| Cow position: | chr14:38460517-38460269 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr14:45027017-45026771 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 602-842 |
| Cow position: | chr14:50113307-50113551 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 603-842 |
| Cow position: | chr14:16917789-16917543 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 603-842 |
| Cow position: | chr14:33679019-33679247 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 611-807 |
| Cow position: | chr14:44254816-44254625 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 163, 48 |
| Conread position: | 612-839 |
| Cow position: | chr14:31150274-31150511 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 614-842 |
| Cow position: | chr14:13580783-13581015 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 622-841 |
| Cow position: | chr14:27065799-27065588 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 161, 26 |
| Conread position: | 622-842 |
| Cow position: | chr14:13463397-13463615 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 623-824 |
| Cow position: | chr14:30704143-30703942 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 159, 24 |
| Conread position: | 625-842 |
| Cow position: | chr14:32448924-32449146 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 163, 46 |
| Conread position: | 628-789 |
| Cow position: | chr14:37226124-37226282 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 628-836 |
| Cow position: | chr14:26457099-26457311 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 628-839 |
| Cow position: | chr14:41411713-41411927 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 628-839 |
| Cow position: | chr14:44553794-44554006 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 156, 46 |
| Conread position: | 628-839 |
| Cow position: | chr14:46503659-46503871 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 157, 43 |
| Conread position: | 628-840 |
| Cow position: | chr14:13086922-13087132 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 149, 93 |
| Conread position: | 628-840 |
| Cow position: | chr14:13781831-13782043 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 162, 43 |
| Conread position: | 628-841 |
| Cow position: | chr14:14421451-14421225 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 628-842 |
| Cow position: | chr14:449759-449969 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 152, 39 |
| Conread position: | 628-842 |
| Cow position: | chr14:13861553-13861334 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 161, 43 |
| Conread position: | 628-842 |
| Cow position: | chr14:15273585-15273367 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 150, 43 |
| Conread position: | 628-842 |
| Cow position: | chr14:22029501-22029282 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 149, 45 |
| Conread position: | 628-842 |
| Cow position: | chr14:28209865-28210084 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 155, 43 |
| Conread position: | 628-842 |
| Cow position: | chr14:33490793-33491003 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 153, 39 |
| Conread position: | 628-842 |
| Cow position: | chr14:36908238-36908019 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 628-842 |
| Cow position: | chr14:39772293-39772512 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 152, 40 |
| Conread position: | 628-842 |
| Cow position: | chr14:42121613-42121391 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 130, 41 |
| Conread position: | 628-842 |
| Cow position: | chr14:44381302-44381520 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 628-842 |
| Cow position: | chr14:46123095-46123313 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 93, 43 |
| Conread position: | 628-842 |
| Cow position: | chr14:46389292-46389076 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 628-842 |
| Cow position: | chr14:46406281-46406498 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 157, 30 |
| Conread position: | 628-844 |
| Cow position: | chr14:38813509-38813293 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 153, 31 |
| Conread position: | 629-840 |
| Cow position: | chr14:44260427-44260648 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 106, 30 |
| Conread position: | 629-842 |
| Cow position: | chr14:45236484-45236695 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 132, 37 |
| Conread position: | 631-842 |
| Cow position: | chr14:46638598-46638811 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 124, 40 |
| Conread position: | 633-842 |
| Cow position: | chr14:30713811-30713597 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 150, 38 |
| Conread position: | 633-842 |
| Cow position: | chr14:31684712-31684498 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 150, 38 |
| Conread position: | 636-842 |
| Cow position: | chr14:46222056-46222267 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 147, 35 |
| Conread position: | 640-836 |
| Cow position: | chr14:44889254-44889053 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 33 |
| Conread position: | 661-842 |
| Cow position: | chr14:8899280-8899469 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 123, 0 |
Show alignments to all cow chromosomes.