Cow genome map
| Conread name: | Thy1-THY010060E08 |
| Conread position: | 602-840 |
| Cow position: | chr29:25930227-25929981 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr29:8624900-8624655 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr29:10645119-10644874 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr29:15624413-15624161 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr29:15967264-15967016 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr29:15996089-15995840 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr29:16171817-16171571 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr29:16346496-16346743 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 602-842 |
| Cow position: | chr29:19656193-19656441 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr29:23978998-23979248 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 602-842 |
| Cow position: | chr29:32557456-32557208 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr29:35274730-35274482 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 602-842 |
| Cow position: | chr29:39077422-39077177 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr29:42256685-42256437 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 603-842 |
| Cow position: | chr29:2102136-2102383 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 626-842 |
| Cow position: | chr29:46139-45923 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 150, 45 |
| Conread position: | 626-842 |
| Cow position: | chr29:15797444-15797227 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 157, 45 |
| Conread position: | 628-787 |
| Cow position: | chr29:45625667-45625823 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 628-839 |
| Cow position: | chr29:648141-648356 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 156, 43 |
| Conread position: | 628-839 |
| Cow position: | chr29:5980402-5980185 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 109, 54 |
| Conread position: | 628-840 |
| Cow position: | chr29:6263679-6263465 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 138, 43 |
| Conread position: | 628-840 |
| Cow position: | chr29:17407457-17407674 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 156, 45 |
| Conread position: | 628-842 |
| Cow position: | chr29:107381-107595 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 156, 20 |
| Conread position: | 628-842 |
| Cow position: | chr29:131842-132059 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 153, 45 |
| Conread position: | 628-842 |
| Cow position: | chr29:408937-408721 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 162, 43 |
| Conread position: | 628-842 |
| Cow position: | chr29:530078-529861 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 161, 43 |
| Conread position: | 628-842 |
| Cow position: | chr29:2692771-2692987 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 156, 40 |
| Conread position: | 628-842 |
| Cow position: | chr29:2839018-2838799 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 156, 42 |
| Conread position: | 628-842 |
| Cow position: | chr29:4518223-4518437 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 153, 40 |
| Conread position: | 628-842 |
| Cow position: | chr29:9640456-9640238 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 156, 43 |
| Conread position: | 628-842 |
| Cow position: | chr29:13019014-13019225 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 154, 44 |
| Conread position: | 628-842 |
| Cow position: | chr29:13057065-13057289 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 628-842 |
| Cow position: | chr29:14209227-14209011 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 161, 43 |
| Conread position: | 628-842 |
| Cow position: | chr29:16013965-16013746 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 628-842 |
| Cow position: | chr29:26162517-26162299 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 149, 45 |
| Conread position: | 628-842 |
| Cow position: | chr29:32288706-32288921 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 140, 43 |
| Conread position: | 628-842 |
| Cow position: | chr29:34739515-34739299 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 156, 43 |
| Conread position: | 628-842 |
| Cow position: | chr29:43325833-43326037 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 628-842 |
| Cow position: | chr29:45206834-45207049 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 147, 43 |
| Conread position: | 630-842 |
| Cow position: | chr29:32542473-32542674 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 125, 41 |
| Conread position: | 631-839 |
| Cow position: | chr29:19889901-19890111 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 153, 40 |
| Conread position: | 631-842 |
| Cow position: | chr29:5785134-5785350 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 152, 40 |
| Conread position: | 631-842 |
| Cow position: | chr29:10821595-10821379 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 158, 40 |
| Conread position: | 631-842 |
| Cow position: | chr29:28658048-28657832 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 153, 40 |
| Conread position: | 631-842 |
| Cow position: | chr29:32514649-32514862 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 158, 40 |
| Conread position: | 633-767 |
| Cow position: | chr29:10022002-10021871 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 633-842 |
| Cow position: | chr29:15260666-15260452 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 150, 38 |
| Conread position: | 633-842 |
| Cow position: | chr29:16037090-16036876 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 152, 38 |
| Conread position: | 633-842 |
| Cow position: | chr29:39424815-39424601 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 150, 38 |
| Conread position: | 633-842 |
| Cow position: | chr29:40293659-40293873 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 150, 38 |
| Conread position: | 634-842 |
| Cow position: | chr29:21430528-21430316 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 151, 37 |
| Conread position: | 649-842 |
| Cow position: | chr29:8665866-8666059 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 654-834 |
| Cow position: | chr29:17152664-17152835 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 656-842 |
| Cow position: | chr29:35299263-35299457 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 690-839 |
| Cow position: | chr29:34732819-34732670 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.