Cow genome map
| Conread name: | Thy1-THY010060E08 |
| Conread position: | 581-842 |
| Cow position: | chr8:26877750-26878019 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 602-750 |
| Cow position: | chr8:10741114-10740966 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-787 |
| Cow position: | chr8:46801389-46801204 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-839 |
| Cow position: | chr8:18403802-18403560 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:43510-43270 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:5019537-5019785 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 602-842 |
| Cow position: | chr8:14630704-14630456 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 602-842 |
| Cow position: | chr8:15223335-15223583 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:21251769-21252014 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:35129271-35129023 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 602-842 |
| Cow position: | chr8:36333786-36333541 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:36633986-36633741 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:38393158-38393406 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:39193392-39193144 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:45793224-45792976 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:46059426-46059186 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 602-842 |
| Cow position: | chr8:47468146-47467901 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:49285537-49285289 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 602-842 |
| Cow position: | chr8:50431619-50431370 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 612-763 |
| Cow position: | chr8:21585424-21585575 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 612-839 |
| Cow position: | chr8:47888391-47888631 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 138, 61 |
| Conread position: | 612-840 |
| Cow position: | chr8:55087078-55087306 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 169, 47 |
| Conread position: | 612-841 |
| Cow position: | chr8:9640433-9640667 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 177, 61 |
| Conread position: | 612-842 |
| Cow position: | chr8:5680618-5680391 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 149, 47 |
| Conread position: | 612-842 |
| Cow position: | chr8:49414611-49414842 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 172, 40 |
| Conread position: | 614-842 |
| Cow position: | chr8:55271987-55271754 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 170, 57 |
| Conread position: | 620-842 |
| Cow position: | chr8:32629463-32629239 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 7, 53 |
| Conread position: | 628-766 |
| Cow position: | chr8:45157988-45157851 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 628-791 |
| Cow position: | chr8:11604787-11604947 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 628-834 |
| Cow position: | chr8:5244850-5244645 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 156, 45 |
| Conread position: | 628-836 |
| Cow position: | chr8:46217055-46216835 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 103, 43 |
| Conread position: | 628-837 |
| Cow position: | chr8:27536306-27536096 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 154, 45 |
| Conread position: | 628-839 |
| Cow position: | chr8:29922797-29922597 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 628-840 |
| Cow position: | chr8:4272831-4273042 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 628-840 |
| Cow position: | chr8:41949769-41949985 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 158, 43 |
| Conread position: | 628-841 |
| Cow position: | chr8:19333131-19333346 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 148, 43 |
| Conread position: | 628-841 |
| Cow position: | chr8:23773192-23773407 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 628-841 |
| Cow position: | chr8:58855242-58855459 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 156, 41 |
| Conread position: | 628-842 |
| Cow position: | chr8:1582009-1582229 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 155, 45 |
| Conread position: | 628-842 |
| Cow position: | chr8:7163907-7164126 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 163, 43 |
| Conread position: | 628-842 |
| Cow position: | chr8:11777217-11777428 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 155, 24 |
| Conread position: | 628-842 |
| Cow position: | chr8:11835086-11835305 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 161, 43 |
| Conread position: | 628-842 |
| Cow position: | chr8:14589316-14589098 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 156, 29 |
| Conread position: | 628-842 |
| Cow position: | chr8:17313594-17313810 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 628-842 |
| Cow position: | chr8:21154790-21154571 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 163, 43 |
| Conread position: | 628-842 |
| Cow position: | chr8:24913732-24913513 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 156, 43 |
| Conread position: | 628-842 |
| Cow position: | chr8:32317030-32316811 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 628-842 |
| Cow position: | chr8:42486466-42486680 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 163, 43 |
| Conread position: | 628-842 |
| Cow position: | chr8:44241132-44240919 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 161, 20 |
| Conread position: | 628-842 |
| Cow position: | chr8:49219496-49219716 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 155, 24 |
| Conread position: | 628-842 |
| Cow position: | chr8:52860800-52861024 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 629-842 |
| Cow position: | chr8:44123656-44123871 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 155, 42 |
| Conread position: | 630-842 |
| Cow position: | chr8:4688956-4689173 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 630-842 |
| Cow position: | chr8:13372458-13372675 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 154, 26 |
| Conread position: | 631-842 |
| Cow position: | chr8:8515526-8515310 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 144, 40 |
| Conread position: | 631-842 |
| Cow position: | chr8:9738094-9738306 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 154, 40 |
| Conread position: | 631-842 |
| Cow position: | chr8:10750904-10751116 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 152, 28 |
| Conread position: | 631-842 |
| Cow position: | chr8:14257644-14257860 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 152, 42 |
| Conread position: | 631-842 |
| Cow position: | chr8:30156664-30156876 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 153, 28 |
| Conread position: | 633-787 |
| Cow position: | chr8:3955604-3955755 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 633-842 |
| Cow position: | chr8:1467685-1467899 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 152, 38 |
| Conread position: | 633-842 |
| Cow position: | chr8:1569680-1569894 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 152, 38 |
| Conread position: | 633-842 |
| Cow position: | chr8:6203721-6203511 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 152, 38 |
| Conread position: | 633-842 |
| Cow position: | chr8:29629053-29628839 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 152, 38 |
| Conread position: | 635-842 |
| Cow position: | chr8:25847320-25847106 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 106, 38 |
| Conread position: | 640-842 |
| Cow position: | chr8:11240730-11240523 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 143, 31 |
| Conread position: | 644-842 |
| Cow position: | chr8:24230001-24230203 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 147, 39 |
| Conread position: | 650-842 |
| Cow position: | chr8:12541349-12541153 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 653-841 |
| Cow position: | chr8:32649275-32649474 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 654-842 |
| Cow position: | chr8:4306765-4306960 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 133, 16 |
| Conread position: | 659-835 |
| Cow position: | chr8:61099692-61099512 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 132, 29 |
Show alignments to all cow chromosomes.