Cow genome map
| Conread name: | Thy1-THY010068C08 |
| Conread position: | 2-175 |
| Cow position: | chr1:63314544-63314368 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 76, 54 |
| Conread position: | 4-175 |
| Cow position: | chr1:82383970-82384141 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 170-771 |
| Cow position: | chr1:16216450-16217043 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 90 |
| Conread position: | 174-590 |
| Cow position: | chr1:24652500-24652090 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 138 |
| Conread position: | 174-779 |
| Cow position: | chr1:67292850-67292242 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 101 |
| Conread position: | 176-545 |
| Cow position: | chr1:30519818-30519433 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 24, 114 |
| Conread position: | 177-399 |
| Cow position: | chr1:39545005-39544783 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 128 |
| Conread position: | 177-410 |
| Cow position: | chr1:13877265-13877500 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 177-413 |
| Cow position: | chr1:84227026-84226784 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 177-442 |
| Cow position: | chr1:33713288-33713021 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 177-444 |
| Cow position: | chr1:32566706-32566975 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 177-455 |
| Cow position: | chr1:22619423-22619702 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 177-475 |
| Cow position: | chr1:34693901-34693605 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 55, 128 |
| Conread position: | 177-477 |
| Cow position: | chr1:3934039-3934347 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 177-495 |
| Cow position: | chr1:38419891-38419571 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 177-498 |
| Cow position: | chr1:99315464-99315168 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 177-513 |
| Cow position: | chr1:70419163-70419503 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 54, 123 |
| Conread position: | 177-513 |
| Cow position: | chr1:73197805-73198147 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 177-529 |
| Cow position: | chr1:77115496-77115842 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 177-587 |
| Cow position: | chr1:69404223-69403807 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 177-595 |
| Cow position: | chr1:74285570-74285997 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 177-609 |
| Cow position: | chr1:86595275-86595718 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 132 |
| Conread position: | 177-646 |
| Cow position: | chr1:18274412-18273929 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 186 |
| Conread position: | 177-682 |
| Cow position: | chr1:99018790-99019308 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 177-717 |
| Cow position: | chr1:98658690-98659238 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 177-741 |
| Cow position: | chr1:27178269-27178825 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 49 |
| Conread position: | 177-743 |
| Cow position: | chr1:86611355-86610789 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 97 |
| Conread position: | 177-752 |
| Cow position: | chr1:72081995-72081400 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 183 |
| Conread position: | 177-765 |
| Cow position: | chr1:31417286-31417893 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 177-765 |
| Cow position: | chr1:67833912-67834520 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 316 |
| Conread position: | 177-765 |
| Cow position: | chr1:85792898-85792302 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 177-766 |
| Cow position: | chr1:58200291-58200881 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 177-767 |
| Cow position: | chr1:56724369-56723777 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 393 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 200, 21 |
| Conread position: | 177-767 |
| Cow position: | chr1:57423615-57424222 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 177-767 |
| Cow position: | chr1:80357957-80358562 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 574 |
| Conread position: | 177-767 |
| Cow position: | chr1:82653883-82653284 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 177-767 |
| Cow position: | chr1:86546918-86547520 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 310 |
| Conread position: | 177-768 |
| Cow position: | chr1:93855736-93855137 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 177-769 |
| Cow position: | chr1:102433823-102434421 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 134 |
| Conread position: | 177-770 |
| Cow position: | chr1:79635764-79636348 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 300 |
| Conread position: | 177-772 |
| Cow position: | chr1:17011515-17012125 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 177-772 |
| Cow position: | chr1:29035499-29034908 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 267 |
| Conread position: | 177-772 |
| Cow position: | chr1:40683523-40684083 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 177-772 |
| Cow position: | chr1:56164767-56164163 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 59 |
| Conread position: | 177-775 |
| Cow position: | chr1:6195460-6194845 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 544 |
| Conread position: | 177-775 |
| Cow position: | chr1:55777796-55777195 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 177-775 |
| Cow position: | chr1:91891902-91892505 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 177-775 |
| Cow position: | chr1:91900243-91899614 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 134 |
| Conread position: | 177-776 |
| Cow position: | chr1:62804952-62805567 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 123 |
| Conread position: | 177-776 |
| Cow position: | chr1:69921215-69921825 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 177-779 |
| Cow position: | chr1:26517668-26518279 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 177-779 |
| Cow position: | chr1:33552146-33551533 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 135 |
| Conread position: | 177-779 |
| Cow position: | chr1:63604553-63605169 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 135 |
| Conread position: | 177-779 |
| Cow position: | chr1:68606328-68606934 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 177-779 |
| Cow position: | chr1:72984700-72984110 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 21 |
| Conread position: | 177-779 |
| Cow position: | chr1:79455735-79456363 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 177-779 |
| Cow position: | chr1:94660893-94660282 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 177-789 |
| Cow position: | chr1:8826264-8825652 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 124 |
| Conread position: | 177-789 |
| Cow position: | chr1:57663238-57662621 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 177-793 |
| Cow position: | chr1:9259702-9259089 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 177-793 |
| Cow position: | chr1:12060994-12061622 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 177-793 |
| Cow position: | chr1:28874296-28873673 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 177-793 |
| Cow position: | chr1:30533802-30534425 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 122 |
| Conread position: | 177-793 |
| Cow position: | chr1:42737665-42737051 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 47 |
| Conread position: | 177-793 |
| Cow position: | chr1:59208928-59209558 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 132 |
| Conread position: | 177-793 |
| Cow position: | chr1:63503034-63502426 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 177-793 |
| Cow position: | chr1:72038346-72038958 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 177-793 |
| Cow position: | chr1:72185663-72186286 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 177-793 |
| Cow position: | chr1:76620461-76621089 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 121 |
| Conread position: | 177-793 |
| Cow position: | chr1:79111706-79111083 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 112 |
| Conread position: | 178-767 |
| Cow position: | chr1:40575428-40574832 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 178-769 |
| Cow position: | chr1:99914644-99914040 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 122 |
| Conread position: | 178-792 |
| Cow position: | chr1:102813416-102812784 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 416 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 199 |
| Conread position: | 179-555 |
| Cow position: | chr1:20525694-20525309 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 130 |
| Conread position: | 179-728 |
| Cow position: | chr1:20830108-20829568 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 55 |
| Conread position: | 179-766 |
| Cow position: | chr1:31397903-31397312 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 179-772 |
| Cow position: | chr1:29363515-29362911 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 306 |
| Conread position: | 179-772 |
| Cow position: | chr1:53199760-53199164 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 256 |
| Conread position: | 179-787 |
| Cow position: | chr1:43406609-43406001 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 384 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 127 |
| Conread position: | 179-793 |
| Cow position: | chr1:5356343-5355719 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 120 |
| Conread position: | 180-481 |
| Cow position: | chr1:71442925-71442628 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 180-680 |
| Cow position: | chr1:20080743-20081208 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 46 |
| Conread position: | 181-510 |
| Cow position: | chr1:55320865-55321192 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 124 |
| Conread position: | 181-649 |
| Cow position: | chr1:57696945-57697418 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 299 |
| Conread position: | 181-693 |
| Cow position: | chr1:58882555-58883090 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 181-701 |
| Cow position: | chr1:7141583-7142105 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 353 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 181-750 |
| Cow position: | chr1:40511801-40512376 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 181-756 |
| Cow position: | chr1:85779229-85779806 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 150 |
| Conread position: | 181-767 |
| Cow position: | chr1:33852491-33851904 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 53 |
| Conread position: | 181-775 |
| Cow position: | chr1:88131989-88131387 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 49 |
| Conread position: | 181-788 |
| Cow position: | chr1:66105124-66104511 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 382 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 97 |
| Conread position: | 182-582 |
| Cow position: | chr1:53364764-53364363 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 125 |
| Conread position: | 182-767 |
| Cow position: | chr1:11290899-11291489 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 183-767 |
| Cow position: | chr1:48247053-48246451 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 129 |
| Conread position: | 183-775 |
| Cow position: | chr1:3384810-3385406 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 129 |
| Conread position: | 185-595 |
| Cow position: | chr1:102781089-102781504 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 186-663 |
| Cow position: | chr1:9381394-9381874 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 319 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 187-570 |
| Cow position: | chr1:55275824-55276214 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 187-699 |
| Cow position: | chr1:30282490-30283013 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 187-793 |
| Cow position: | chr1:31359615-31359034 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 397 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 48, 131 |
| Conread position: | 187-793 |
| Cow position: | chr1:55155790-55156407 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 134 |
| Conread position: | 190-769 |
| Cow position: | chr1:18026599-18027176 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 48 |
| Conread position: | 190-789 |
| Cow position: | chr1:43570209-43570808 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 191-771 |
| Cow position: | chr1:88212607-88213175 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 366 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 74, 49 |
| Conread position: | 192-686 |
| Cow position: | chr1:67326731-67327206 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 337 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 193-761 |
| Cow position: | chr1:29608498-29609059 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 12 |
| Conread position: | 195-772 |
| Cow position: | chr1:82911948-82912529 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 38 |
| Conread position: | 197-370 |
| Cow position: | chr1:16581308-16581481 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 197-681 |
| Cow position: | chr1:39539750-39540232 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 197-779 |
| Cow position: | chr1:18241323-18241905 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 201-769 |
| Cow position: | chr1:82922993-82923568 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 207-772 |
| Cow position: | chr1:23052950-23052390 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 218-536 |
| Cow position: | chr1:1460025-1460343 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 122, 18 |
| Conread position: | 231-497 |
| Cow position: | chr1:44150553-44150295 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 231-776 |
| Cow position: | chr1:25551118-25550571 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 231-776 |
| Cow position: | chr1:44100243-44100787 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 232-398 |
| Cow position: | chr1:29039196-29039030 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 232-398 |
| Cow position: | chr1:77510609-77510772 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 232-646 |
| Cow position: | chr1:40438020-40438401 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 278, 79 |
| Conread position: | 232-769 |
| Cow position: | chr1:25178874-25179408 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 59 |
| Conread position: | 232-769 |
| Cow position: | chr1:65387475-65386949 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 59 |
| Conread position: | 232-770 |
| Cow position: | chr1:88269080-88269621 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 70 |
| Conread position: | 232-771 |
| Cow position: | chr1:91446617-91446090 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 78 |
| Conread position: | 232-779 |
| Cow position: | chr1:49973029-49973581 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 232-793 |
| Cow position: | chr1:52358104-52358679 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 30 |
| Conread position: | 232-793 |
| Cow position: | chr1:56143183-56143739 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 68 |
| Conread position: | 232-793 |
| Cow position: | chr1:76544380-76544943 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 71 |
| Conread position: | 237-495 |
| Cow position: | chr1:101860919-101861166 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 237-641 |
| Cow position: | chr1:57658035-57657634 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 54 |
| Conread position: | 237-793 |
| Cow position: | chr1:22345233-22344680 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 62 |
| Conread position: | 238-480 |
| Cow position: | chr1:56936508-56936744 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 238-772 |
| Cow position: | chr1:67287973-67287441 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 65 |
| Conread position: | 239-731 |
| Cow position: | chr1:59648437-59647962 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 321 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 240-772 |
| Cow position: | chr1:13451356-13450818 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 240-793 |
| Cow position: | chr1:8555477-8554924 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 60 |
| Conread position: | 241-433 |
| Cow position: | chr1:2412911-2413100 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 190, 70 |
| Conread position: | 262-453 |
| Cow position: | chr1:43636806-43636615 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 41 |
| Conread position: | 262-647 |
| Cow position: | chr1:53563017-53562640 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 248, 41 |
| Conread position: | 262-752 |
| Cow position: | chr1:28712017-28711523 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 39 |
| Conread position: | 262-793 |
| Cow position: | chr1:62243516-62244047 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 38 |
| Conread position: | 268-561 |
| Cow position: | chr1:78923217-78922935 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 36 |
| Conread position: | 273-793 |
| Cow position: | chr1:44044897-44044375 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 27 |
| Conread position: | 276-779 |
| Cow position: | chr1:70385572-70385063 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 279-768 |
| Cow position: | chr1:21691127-21691617 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 308 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 251, 8 |
| Conread position: | 282-770 |
| Cow position: | chr1:88374702-88375162 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 22 |
| Conread position: | 286-789 |
| Cow position: | chr1:43984983-43985481 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 329 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 95, 15 |
| Conread position: | 300-764 |
| Cow position: | chr1:81863410-81863882 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 100 |
| Conread position: | 303-582 |
| Cow position: | chr1:32662815-32662542 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 304-459 |
| Cow position: | chr1:76703199-76703354 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 305-767 |
| Cow position: | chr1:67000095-66999634 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 47 |
| Conread position: | 314-779 |
| Cow position: | chr1:58336914-58336445 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 231 |
| Conread position: | 315-772 |
| Cow position: | chr1:71561497-71561959 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 426 |
| Conread position: | 318-772 |
| Cow position: | chr1:69767526-69767076 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 72 |
| Conread position: | 348-533 |
| Cow position: | chr1:40054678-40054492 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 122, 129 |
| Conread position: | 391-775 |
| Cow position: | chr1:76751650-76752035 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 74 |
| Conread position: | 401-770 |
| Cow position: | chr1:74256060-74256432 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 110 |
| Conread position: | 478-793 |
| Cow position: | chr1:33713007-33712687 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 42, 263 |
| Conread position: | 555-792 |
| Cow position: | chr1:82367018-82366778 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 597-793 |
| Cow position: | chr1:28278759-28278565 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 32 |
Show alignments to all cow chromosomes.