Cow genome map
| Conread name: | Thy1-THY010068C08 |
| Conread position: | 174-686 |
| Cow position: | chr10:187337-186815 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 131 |
| Conread position: | 174-793 |
| Cow position: | chr10:22102479-22101854 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 62 |
| Conread position: | 176-586 |
| Cow position: | chr10:24311123-24311542 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 279 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 56, 90 |
| Conread position: | 177-407 |
| Cow position: | chr10:51782171-51782405 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 79 |
| Conread position: | 177-411 |
| Cow position: | chr10:22575895-22576122 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 47 |
| Conread position: | 177-451 |
| Cow position: | chr10:28256177-28256454 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 21, 131 |
| Conread position: | 177-464 |
| Cow position: | chr10:31539030-31538739 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 177-476 |
| Cow position: | chr10:14843020-14842720 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 177-501 |
| Cow position: | chr10:17433596-17433256 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 114 |
| Conread position: | 177-574 |
| Cow position: | chr10:57502049-57501656 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 60 |
| Conread position: | 177-600 |
| Cow position: | chr10:42752373-42751945 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 131 |
| Conread position: | 177-647 |
| Cow position: | chr10:32701967-32701493 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 123 |
| Conread position: | 177-657 |
| Cow position: | chr10:14862923-14862449 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 133 |
| Conread position: | 177-680 |
| Cow position: | chr10:39778876-39779390 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 409 |
| Conread position: | 177-693 |
| Cow position: | chr10:1378745-1378222 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 131 |
| Conread position: | 177-744 |
| Cow position: | chr10:30684253-30684848 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 95 |
| Conread position: | 177-762 |
| Cow position: | chr10:39181035-39180436 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 177-767 |
| Cow position: | chr10:11684392-11685003 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 317 |
| Conread position: | 177-767 |
| Cow position: | chr10:14805085-14804476 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 133 |
| Conread position: | 177-767 |
| Cow position: | chr10:19495049-19495637 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 57 |
| Conread position: | 177-767 |
| Cow position: | chr10:19544150-19544726 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 177-767 |
| Cow position: | chr10:41878162-41877562 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 134 |
| Conread position: | 177-767 |
| Cow position: | chr10:55094510-55093908 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 177-769 |
| Cow position: | chr10:38544686-38545273 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 125 |
| Conread position: | 177-772 |
| Cow position: | chr10:21399439-21400034 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 57 |
| Conread position: | 177-772 |
| Cow position: | chr10:21481173-21480558 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 131 |
| Conread position: | 177-772 |
| Cow position: | chr10:40151013-40151609 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 57 |
| Conread position: | 177-772 |
| Cow position: | chr10:41158686-41158084 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 128 |
| Conread position: | 177-772 |
| Cow position: | chr10:47908173-47907567 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 177-775 |
| Cow position: | chr10:2119774-2120377 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 177-779 |
| Cow position: | chr10:38344120-38344730 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 122 |
| Conread position: | 177-779 |
| Cow position: | chr10:57988755-57989360 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 177-785 |
| Cow position: | chr10:40462303-40461713 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 396 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 177-791 |
| Cow position: | chr10:39040056-39040685 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 399 |
| Conread position: | 177-793 |
| Cow position: | chr10:279368-279992 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 177-793 |
| Cow position: | chr10:7280863-7281472 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 59 |
| Conread position: | 177-793 |
| Cow position: | chr10:11821981-11821388 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 20 |
| Conread position: | 177-793 |
| Cow position: | chr10:14334606-14335233 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 177-793 |
| Cow position: | chr10:29845406-29846028 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 5 |
| Conread position: | 178-588 |
| Cow position: | chr10:29109904-29110318 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 61, 48 |
| Conread position: | 178-779 |
| Cow position: | chr10:58597611-58597023 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 133 |
| Conread position: | 179-641 |
| Cow position: | chr10:27664029-27664496 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 125 |
| Conread position: | 179-718 |
| Cow position: | chr10:57556098-57556649 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 130 |
| Conread position: | 179-740 |
| Cow position: | chr10:19840920-19840350 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 130 |
| Conread position: | 179-793 |
| Cow position: | chr10:28642774-28642149 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 181-538 |
| Cow position: | chr10:40398234-40397893 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 328, 33 |
| Conread position: | 181-604 |
| Cow position: | chr10:29011417-29011845 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 244 |
| Conread position: | 181-630 |
| Cow position: | chr10:44708376-44708835 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 83 |
| Conread position: | 181-730 |
| Cow position: | chr10:42750055-42749514 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 118 |
| Conread position: | 181-767 |
| Cow position: | chr10:41568336-41567744 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 100 |
| Conread position: | 181-787 |
| Cow position: | chr10:58812516-58813121 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 406 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 51, 104 |
| Conread position: | 181-793 |
| Cow position: | chr10:50135808-50135177 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 182-641 |
| Cow position: | chr10:1665297-1665764 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 129 |
| Conread position: | 185-514 |
| Cow position: | chr10:38849521-38849205 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 16 |
| Conread position: | 185-543 |
| Cow position: | chr10:58096794-58097143 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 185-746 |
| Cow position: | chr10:13220196-13220742 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 356 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 67, 100 |
| Conread position: | 185-793 |
| Cow position: | chr10:34286492-34285873 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 193-771 |
| Cow position: | chr10:66899155-66899723 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 45 |
| Conread position: | 196-787 |
| Cow position: | chr10:29722831-29723436 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 206-779 |
| Cow position: | chr10:16477956-16477391 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 231-793 |
| Cow position: | chr10:38537320-38537881 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 71 |
| Conread position: | 232-476 |
| Cow position: | chr10:51844017-51844256 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 45 |
| Conread position: | 232-640 |
| Cow position: | chr10:3541893-3542281 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 278 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 287, 49 |
| Conread position: | 232-745 |
| Cow position: | chr10:28928782-28929286 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 72 |
| Conread position: | 232-769 |
| Cow position: | chr10:8326144-8326653 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 64 |
| Conread position: | 237-509 |
| Cow position: | chr10:64146101-64145836 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 238-789 |
| Cow position: | chr10:32558519-32557974 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 365 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 238-793 |
| Cow position: | chr10:24976601-24977144 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 64 |
| Conread position: | 262-613 |
| Cow position: | chr10:47083620-47083971 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 38 |
| Conread position: | 271-751 |
| Cow position: | chr10:2232615-2233080 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 304 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 176, 39 |
| Conread position: | 304-769 |
| Cow position: | chr10:21488029-21487561 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 308-793 |
| Cow position: | chr10:125496-125008 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 14 |
| Conread position: | 315-793 |
| Cow position: | chr10:11699342-11698859 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 162 |
| Conread position: | 323-776 |
| Cow position: | chr10:39815447-39815908 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 419 |
| Conread position: | 339-793 |
| Cow position: | chr10:29631693-29632151 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 110 |
| Conread position: | 348-688 |
| Cow position: | chr10:7274837-7274492 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 234 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 348-793 |
| Cow position: | chr10:21730782-21731231 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 349-548 |
| Cow position: | chr10:20290773-20290972 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 121, 128 |
| Conread position: | 349-602 |
| Cow position: | chr10:4190749-4191004 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 162, 41 |
| Conread position: | 350-779 |
| Cow position: | chr10:62407781-62408214 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 5 |
| Conread position: | 434-770 |
| Cow position: | chr10:31538632-31538298 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 544-747 |
| Cow position: | chr10:41774311-41774516 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 552-793 |
| Cow position: | chr10:19714705-19714949 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 155 |
| Conread position: | 568-779 |
| Cow position: | chr10:42229666-42229450 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 36 |
Show alignments to all cow chromosomes.