Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 157-576
Cow position:
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 98

Conread position: 164-510
Cow position:
Alignm length: 351
Alignm identity: 228
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 34

Conread position: 167-688
Cow position:
Alignm length: 534
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 6

Conread position: 170-624
Cow position:
Alignm length: 482
Alignm identity: 326
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 53, 142

Conread position: 170-779
Cow position:
Alignm length: 631
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 146

Conread position: 170-779
Cow position:
Alignm length: 624
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 130

Conread position: 174-685
Cow position:
Alignm length: 521
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 38

Conread position: 174-779
Cow position:
Alignm length: 636
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 13

Conread position: 176-411
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 21

Conread position: 176-555
Cow position:
Alignm length: 389
Alignm identity: 255
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 57, 124

Conread position: 176-767
Cow position:
Alignm length: 604
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 19

Conread position: 176-793
Cow position:
Alignm length: 631
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 48

Conread position: 176-793
Cow position:
Alignm length: 633
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 124

Conread position: 177-413
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 58, 41

Conread position: 177-413
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 113

Conread position: 177-467
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 55, 47

Conread position: 177-472
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 56, 96

Conread position: 177-486
Cow position:
Alignm length: 311
Alignm identity: 222
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 285, 58

Conread position: 177-495
Cow position:
Alignm length: 332
Alignm identity: 218
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 47

Conread position: 177-589
Cow position:
Alignm length: 421
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 132

Conread position: 177-605
Cow position:
Alignm length: 444
Alignm identity: 297
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 40, 67

Conread position: 177-748
Cow position:
Alignm length: 588
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 22

Conread position: 177-751
Cow position:
Alignm length: 590
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 123

Conread position: 177-767
Cow position:
Alignm length: 610
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-767
Cow position:
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 83

Conread position: 177-767
Cow position:
Alignm length: 621
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 197

Conread position: 177-767
Cow position:
Alignm length: 608
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 127

Conread position: 177-768
Cow position:
Alignm length: 605
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 177-769
Cow position:
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 131

Conread position: 177-769
Cow position:
Alignm length: 613
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 546

Conread position: 177-770
Cow position:
Alignm length: 612
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-772
Cow position:
Alignm length: 605
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 128

Conread position: 177-772
Cow position:
Alignm length: 612
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 293

Conread position: 177-775
Cow position:
Alignm length: 611
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 177-775
Cow position:
Alignm length: 616
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-779
Cow position:
Alignm length: 626
Alignm identity: 400
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 131

Conread position: 177-787
Cow position:
Alignm length: 617
Alignm identity: 400
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 245, 8

Conread position: 177-788
Cow position:
Alignm length: 626
Alignm identity: 393
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 98

Conread position: 177-789
Cow position:
Alignm length: 626
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 139

Conread position: 177-789
Cow position:
Alignm length: 633
Alignm identity: 397
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 44, 18

Conread position: 177-793
Cow position:
Alignm length: 634
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-793
Cow position:
Alignm length: 635
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 124

Conread position: 177-793
Cow position:
Alignm length: 626
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 103

Conread position: 177-793
Cow position:
Alignm length: 640
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 142

Conread position: 177-793
Cow position:
Alignm length: 630
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 134

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 124

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 177-793
Cow position:
Alignm length: 623
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 79

Conread position: 178-413
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 38

Conread position: 178-793
Cow position:
Alignm length: 632
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 179-581
Cow position:
Alignm length: 419
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 130

Conread position: 179-621
Cow position:
Alignm length: 455
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 114

Conread position: 179-688
Cow position:
Alignm length: 526
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 179-793
Cow position:
Alignm length: 631
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 179-793
Cow position:
Alignm length: 621
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 55

Conread position: 180-791
Cow position:
Alignm length: 620
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 134

Conread position: 181-536
Cow position:
Alignm length: 370
Alignm identity: 238
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 124

Conread position: 181-658
Cow position:
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 131

Conread position: 181-720
Cow position:
Alignm length: 556
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 191

Conread position: 181-764
Cow position:
Alignm length: 615
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 583

Conread position: 181-772
Cow position:
Alignm length: 620
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 126

Conread position: 181-793
Cow position:
Alignm length: 629
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 183-476
Cow position:
Alignm length: 300
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 127

Conread position: 185-501
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 48, 104

Conread position: 185-767
Cow position:
Alignm length: 600
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 123

Conread position: 190-793
Cow position:
Alignm length: 618
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 28

Conread position: 192-491
Cow position:
Alignm length: 300
Alignm identity: 201
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 193-708
Cow position:
Alignm length: 525
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 114

Conread position: 199-768
Cow position:
Alignm length: 578
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 33

Conread position: 207-642
Cow position:
Alignm length: 439
Alignm identity: 295
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 334, 23

Conread position: 208-792
Cow position:
Alignm length: 598
Alignm identity: 378
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 307, 28

Conread position: 231-575
Cow position:
Alignm length: 350
Alignm identity: 227
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 179, 35

Conread position: 231-729
Cow position:
Alignm length: 503
Alignm identity: 314
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 39, 43

Conread position: 232-356
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 73

Conread position: 232-413
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 232-419
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 183, 90

Conread position: 232-478
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 0

Conread position: 232-489
Cow position:
Alignm length: 258
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 232-595
Cow position:
Alignm length: 365
Alignm identity: 244
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 136, 17

Conread position: 232-596
Cow position:
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 36

Conread position: 232-728
Cow position:
Alignm length: 503
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 70

Conread position: 232-762
Cow position:
Alignm length: 538
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 71

Conread position: 232-769
Cow position:
Alignm length: 545
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 25

Conread position: 232-789
Cow position:
Alignm length: 561
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 78

Conread position: 238-688
Cow position:
Alignm length: 459
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 53

Conread position: 238-752
Cow position:
Alignm length: 523
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 65

Conread position: 238-762
Cow position:
Alignm length: 530
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 36

Conread position: 238-793
Cow position:
Alignm length: 563
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 53

Conread position: 239-536
Cow position:
Alignm length: 299
Alignm identity: 212
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 270, 42

Conread position: 239-540
Cow position:
Alignm length: 303
Alignm identity: 201
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 272, 65

Conread position: 263-779
Cow position:
Alignm length: 527
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 36

Conread position: 272-761
Cow position:
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 38

Conread position: 291-536
Cow position:
Alignm length: 247
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 217, 19

Conread position: 296-792
Cow position:
Alignm length: 504
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 18

Conread position: 306-758
Cow position:
Alignm length: 458
Alignm identity: 277
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 133, 23

Conread position: 309-506
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 318-793
Cow position:
Alignm length: 480
Alignm identity: 311
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 87, 11

Conread position: 326-793
Cow position:
Alignm length: 474
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 73

Conread position: 330-769
Cow position:
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 298

Conread position: 348-643
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 359-558
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 118

Conread position: 391-769
Cow position:
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 232

Conread position: 418-789
Cow position:
Alignm length: 375
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 144

Conread position: 424-789
Cow position:
Alignm length: 376
Alignm identity: 238
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 96, 33

Conread position: 434-789
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 88, 220

Conread position: 436-793
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 198

Conread position: 458-791
Cow position:
Alignm length: 340
Alignm identity: 230
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 201

Conread position: 547-793
Cow position:
Alignm length: 249
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 90

Conread position: 579-789
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.