Cow genome map
| Conread name: | Thy1-THY010068C08 |
| Conread position: | 1-177 |
| Cow position: | chr12:8137457-8137281 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-767 |
| Cow position: | chr12:14661460-14662063 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 5 |
| Conread position: | 177-441 |
| Cow position: | chr12:23141026-23141298 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 146 |
| Conread position: | 177-553 |
| Cow position: | chr12:12293124-12292755 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 177-643 |
| Cow position: | chr12:21128295-21127859 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 49 |
| Conread position: | 177-663 |
| Cow position: | chr12:27931737-27932232 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 177-686 |
| Cow position: | chr12:25554194-25554723 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 116 |
| Conread position: | 177-767 |
| Cow position: | chr12:32654714-32654110 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 298 |
| Conread position: | 177-769 |
| Cow position: | chr12:1403659-1403059 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 133 |
| Conread position: | 177-772 |
| Cow position: | chr12:43030215-43030825 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 177-776 |
| Cow position: | chr12:11099389-11098795 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 47 |
| Conread position: | 177-780 |
| Cow position: | chr12:600197-600802 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 177-793 |
| Cow position: | chr12:21942899-21942280 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 177-793 |
| Cow position: | chr12:25099906-25100514 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 177-793 |
| Cow position: | chr12:25262299-25262926 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 177-793 |
| Cow position: | chr12:27854797-27855418 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 178-494 |
| Cow position: | chr12:35345715-35345407 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 95, 50 |
| Conread position: | 179-578 |
| Cow position: | chr12:21387078-21387485 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 42, 101 |
| Conread position: | 179-793 |
| Cow position: | chr12:3362104-3361467 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 580 |
| Conread position: | 180-767 |
| Cow position: | chr12:21209812-21209228 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 181-768 |
| Cow position: | chr12:6405479-6406078 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 119 |
| Conread position: | 182-772 |
| Cow position: | chr12:21429027-21428421 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 42 |
| Conread position: | 184-793 |
| Cow position: | chr12:21199111-21198504 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 47 |
| Conread position: | 232-412 |
| Cow position: | chr12:14695116-14694942 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 232-776 |
| Cow position: | chr12:17979833-17979293 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 68 |
| Conread position: | 232-793 |
| Cow position: | chr12:22204639-22205200 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 72 |
| Conread position: | 238-656 |
| Cow position: | chr12:32677840-32678268 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 291 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 199, 54 |
| Conread position: | 238-682 |
| Cow position: | chr12:41380778-41380332 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 62 |
| Conread position: | 239-497 |
| Cow position: | chr12:349457-349205 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 239-595 |
| Cow position: | chr12:11580858-11580491 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 263-793 |
| Cow position: | chr12:36367904-36367377 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 268-769 |
| Cow position: | chr12:35313610-35314086 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 339 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 243, 19 |
| Conread position: | 269-489 |
| Cow position: | chr12:28004991-28004786 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 279-751 |
| Cow position: | chr12:5551858-5552314 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 299 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 382, 20 |
| Conread position: | 394-775 |
| Cow position: | chr12:28765073-28765457 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 315 |
| Conread position: | 437-793 |
| Cow position: | chr12:36480067-36479718 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 42 |
Show alignments to all cow chromosomes.