Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 174-445
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 61, 113

Conread position: 174-510
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 136

Conread position: 174-767
Cow position:
Alignm length: 613
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 580

Conread position: 174-793
Cow position:
Alignm length: 632
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 135

Conread position: 177-474
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 57, 119

Conread position: 177-481
Cow position:
Alignm length: 314
Alignm identity: 212
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 103

Conread position: 177-527
Cow position:
Alignm length: 353
Alignm identity: 245
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 202, 25

Conread position: 177-533
Cow position:
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 119

Conread position: 177-535
Cow position:
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 177-590
Cow position:
Alignm length: 424
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 125

Conread position: 177-684
Cow position:
Alignm length: 521
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 81

Conread position: 177-688
Cow position:
Alignm length: 521
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 136

Conread position: 177-752
Cow position:
Alignm length: 582
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 59

Conread position: 177-767
Cow position:
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 135

Conread position: 177-767
Cow position:
Alignm length: 607
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-768
Cow position:
Alignm length: 602
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 177-769
Cow position:
Alignm length: 612
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 27

Conread position: 177-772
Cow position:
Alignm length: 608
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 134

Conread position: 177-774
Cow position:
Alignm length: 610
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 177-779
Cow position:
Alignm length: 619
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 135

Conread position: 177-789
Cow position:
Alignm length: 622
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 34

Conread position: 177-793
Cow position:
Alignm length: 632
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 123

Conread position: 177-793
Cow position:
Alignm length: 629
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 127

Conread position: 177-793
Cow position:
Alignm length: 632
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 123

Conread position: 177-793
Cow position:
Alignm length: 640
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 141

Conread position: 177-793
Cow position:
Alignm length: 640
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 153

Conread position: 177-793
Cow position:
Alignm length: 636
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 134

Conread position: 178-562
Cow position:
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 135

Conread position: 179-526
Cow position:
Alignm length: 359
Alignm identity: 243
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 55, 130

Conread position: 179-709
Cow position:
Alignm length: 548
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 179-767
Cow position:
Alignm length: 602
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 119

Conread position: 179-785
Cow position:
Alignm length: 634
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 179-792
Cow position:
Alignm length: 634
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 123

Conread position: 179-793
Cow position:
Alignm length: 630
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 107

Conread position: 179-793
Cow position:
Alignm length: 621
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 55

Conread position: 179-793
Cow position:
Alignm length: 625
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 181-448
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 119

Conread position: 181-552
Cow position:
Alignm length: 383
Alignm identity: 254
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 54, 132

Conread position: 181-793
Cow position:
Alignm length: 629
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 185-793
Cow position:
Alignm length: 625
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 124

Conread position: 192-563
Cow position:
Alignm length: 386
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 297

Conread position: 192-688
Cow position:
Alignm length: 507
Alignm identity: 326
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 5, 129

Conread position: 197-720
Cow position:
Alignm length: 527
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 34

Conread position: 222-793
Cow position:
Alignm length: 575
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 65

Conread position: 231-717
Cow position:
Alignm length: 504
Alignm identity: 332
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 299

Conread position: 232-507
Cow position:
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 232-636
Cow position:
Alignm length: 410
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 68

Conread position: 237-410
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 238-642
Cow position:
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 47

Conread position: 238-712
Cow position:
Alignm length: 481
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 53

Conread position: 238-749
Cow position:
Alignm length: 525
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 66

Conread position: 238-793
Cow position:
Alignm length: 563
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 53

Conread position: 253-751
Cow position:
Alignm length: 510
Alignm identity: 315
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 95, 47

Conread position: 262-466
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 282-788
Cow position:
Alignm length: 513
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 14

Conread position: 297-493
Cow position:
Alignm length: 198
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 25

Conread position: 313-696
Cow position:
Alignm length: 392
Alignm identity: 265
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 193, 76

Conread position: 326-793
Cow position:
Alignm length: 472
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 108

Conread position: 348-641
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 129

Conread position: 427-687
Cow position:
Alignm length: 265
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 90

Conread position: 580-760
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 17

Show alignments to all cow chromosomes.