Cow genome map
| Conread name: | Thy1-THY010068C08 |
| Conread position: | 174-772 |
| Cow position: | chr14:27978186-27977576 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 125 |
| Conread position: | 176-498 |
| Cow position: | chr14:43559059-43558734 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 176-637 |
| Cow position: | chr14:33677893-33677416 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 158 |
| Conread position: | 176-759 |
| Cow position: | chr14:13620317-13620916 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 137 |
| Conread position: | 176-780 |
| Cow position: | chr14:44582188-44581567 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 303 |
| Conread position: | 177-448 |
| Cow position: | chr14:30666323-30666048 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 177-562 |
| Cow position: | chr14:22030622-22031010 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 123 |
| Conread position: | 177-572 |
| Cow position: | chr14:40168909-40169294 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 59 |
| Conread position: | 177-615 |
| Cow position: | chr14:13274432-13273979 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 168 |
| Conread position: | 177-619 |
| Cow position: | chr14:38228810-38229215 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 14 |
| Conread position: | 177-688 |
| Cow position: | chr14:5074776-5074281 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 58 |
| Conread position: | 177-693 |
| Cow position: | chr14:37225014-37224487 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 135 |
| Conread position: | 177-696 |
| Cow position: | chr14:45710901-45711422 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 177-708 |
| Cow position: | chr14:45028169-45028726 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 133 |
| Conread position: | 177-741 |
| Cow position: | chr14:2295112-2294523 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 444 |
| Conread position: | 177-743 |
| Cow position: | chr14:17760057-17760622 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 112 |
| Conread position: | 177-769 |
| Cow position: | chr14:16272472-16273076 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 132 |
| Conread position: | 177-769 |
| Cow position: | chr14:19327439-19328048 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 132 |
| Conread position: | 177-769 |
| Cow position: | chr14:46391708-46392300 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 177-772 |
| Cow position: | chr14:2285151-2284555 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 57 |
| Conread position: | 177-772 |
| Cow position: | chr14:9046399-9045784 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 177-772 |
| Cow position: | chr14:12611253-12610669 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 177-772 |
| Cow position: | chr14:44378621-44378022 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 118 |
| Conread position: | 177-775 |
| Cow position: | chr14:7473175-7472580 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 59 |
| Conread position: | 177-775 |
| Cow position: | chr14:12742245-12742851 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 123 |
| Conread position: | 177-775 |
| Cow position: | chr14:16918895-16919500 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 125 |
| Conread position: | 177-779 |
| Cow position: | chr14:12899919-12899312 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 177-779 |
| Cow position: | chr14:17000235-17000849 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 124 |
| Conread position: | 177-783 |
| Cow position: | chr14:47642546-47641918 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 177-793 |
| Cow position: | chr14:5529884-5529264 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 53 |
| Conread position: | 177-793 |
| Cow position: | chr14:45081877-45081246 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 178-621 |
| Cow position: | chr14:29580988-29580548 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 142 |
| Conread position: | 178-685 |
| Cow position: | chr14:9099899-9100414 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 127 |
| Conread position: | 178-688 |
| Cow position: | chr14:35365444-35365949 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 85 |
| Conread position: | 178-772 |
| Cow position: | chr14:48826108-48825512 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 178-789 |
| Cow position: | chr14:30595547-30596178 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 181 |
| Conread position: | 178-793 |
| Cow position: | chr14:13863274-13863885 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 323 |
| Conread position: | 178-793 |
| Cow position: | chr14:44775216-44775840 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 178-793 |
| Cow position: | chr14:46530044-46529427 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 134 |
| Conread position: | 179-793 |
| Cow position: | chr14:751386-750778 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 129 |
| Conread position: | 179-793 |
| Cow position: | chr14:45671226-45671851 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 121 |
| Conread position: | 181-536 |
| Cow position: | chr14:9514468-9514831 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 249 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 181-776 |
| Cow position: | chr14:32447610-32447009 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 130 |
| Conread position: | 181-779 |
| Cow position: | chr14:11153333-11153952 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 137 |
| Conread position: | 181-793 |
| Cow position: | chr14:190786-190163 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 182-772 |
| Cow position: | chr14:37455248-37455825 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 183-775 |
| Cow position: | chr14:17686216-17685617 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 117 |
| Conread position: | 183-793 |
| Cow position: | chr14:15275416-15276032 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 129 |
| Conread position: | 185-778 |
| Cow position: | chr14:35424895-35424318 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 185-793 |
| Cow position: | chr14:33392983-33393582 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 32 |
| Conread position: | 186-693 |
| Cow position: | chr14:33237834-33237324 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 36 |
| Conread position: | 187-514 |
| Cow position: | chr14:41409744-41409396 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 188-644 |
| Cow position: | chr14:38147817-38147349 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 188-767 |
| Cow position: | chr14:23258168-23257581 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 204-504 |
| Cow position: | chr14:21744901-21744596 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 231-793 |
| Cow position: | chr14:29705820-29705280 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 20 |
| Conread position: | 232-592 |
| Cow position: | chr14:50139320-50138964 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 229, 71 |
| Conread position: | 232-658 |
| Cow position: | chr14:11561270-11561696 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 77 |
| Conread position: | 232-688 |
| Cow position: | chr14:40341812-40341357 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 71 |
| Conread position: | 232-741 |
| Cow position: | chr14:44676878-44676372 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 232-775 |
| Cow position: | chr14:48253553-48254085 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 71 |
| Conread position: | 236-598 |
| Cow position: | chr14:20909508-20909151 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 237-641 |
| Cow position: | chr14:38530708-38531107 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 45 |
| Conread position: | 237-684 |
| Cow position: | chr14:33489158-33488723 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 63 |
| Conread position: | 237-760 |
| Cow position: | chr14:44131639-44131129 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 50 |
| Conread position: | 237-768 |
| Cow position: | chr14:48601584-48602106 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 238-501 |
| Cow position: | chr14:37412992-37413251 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 87, 65 |
| Conread position: | 238-595 |
| Cow position: | chr14:30705560-30705913 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 238-767 |
| Cow position: | chr14:13779691-13779181 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 66 |
| Conread position: | 238-793 |
| Cow position: | chr14:33402442-33401889 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 243 |
| Conread position: | 240-790 |
| Cow position: | chr14:47674580-47674043 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 357 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 188, 60 |
| Conread position: | 262-619 |
| Cow position: | chr14:48404241-48404593 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 42 |
| Conread position: | 275-793 |
| Cow position: | chr14:35385356-35385872 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 29 |
| Conread position: | 276-489 |
| Cow position: | chr14:33766838-33766632 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 279-771 |
| Cow position: | chr14:34776932-34776463 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 339 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 297-778 |
| Cow position: | chr14:45189082-45189562 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 5 |
| Conread position: | 298-595 |
| Cow position: | chr14:13462276-13461988 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 24 |
| Conread position: | 304-643 |
| Cow position: | chr14:44689745-44689403 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 172 |
| Conread position: | 350-780 |
| Cow position: | chr14:48971322-48970889 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 82 |
| Conread position: | 495-793 |
| Cow position: | chr14:21744466-21744167 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 285 |
| Conread position: | 544-760 |
| Cow position: | chr14:30762751-30762971 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 566-793 |
| Cow position: | chr14:50111000-50110770 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 141 |
Show alignments to all cow chromosomes.