Cow genome map


           Conread name:
           Thy1-THY010068C08
        

               Conread position:
               170-771
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               402
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               123, 66
               

               Conread position:
               171-793
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 143
               

               Conread position:
               174-760
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               366
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               61, 135
               

               Conread position:
               174-789
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 142
               

               Conread position:
               176-677
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 25
               

               Conread position:
               176-793
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 61
               

               Conread position:
               176-793
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 124
               

               Conread position:
               177-413
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               177-479
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               177-490
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 125
               

               Conread position:
               177-507
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               177-507
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               59, 138
               

               Conread position:
               177-513
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               177-579
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               177-619
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               177-662
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               177-685
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 122
               

               Conread position:
               177-690
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 97
               

               Conread position:
               177-720
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 73
               

               Conread position:
               177-764
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               379
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               59, 129
               

               Conread position:
               177-767
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 86
               

               Conread position:
               177-767
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               177-767
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 116
               

               Conread position:
               177-768
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 24
               

               Conread position:
               177-769
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               177-771
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               380
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               177-771
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               381
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               132, 47
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 70
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 363
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 317
               

               Conread position:
               177-775
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 122
               

               Conread position:
               177-775
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 136
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 132
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               177-786
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 136
               

               Conread position:
               177-787
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 122
               

               Conread position:
               177-789
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 134
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 136
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 47
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 61
               

               Conread position:
               178-398
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               54, 135
               

               Conread position:
               178-495
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               28, 118
               

               Conread position:
               178-536
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               178-663
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 122
               

               Conread position:
               178-765
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 88
               

               Conread position:
               178-793
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               179-539
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               54, 130
               

               Conread position:
               179-772
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               179-779
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               179-785
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 44
               

               Conread position:
               179-793
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 126
               

               Conread position:
               180-605
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               50, 118
               

               Conread position:
               181-387
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 129
               

               Conread position:
               181-479
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               55, 136
               

               Conread position:
               181-779
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 131
               

               Conread position:
               182-530
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               183-405
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 126
               

               Conread position:
               184-565
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               49, 142
               

               Conread position:
               185-484
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               133, 53
               

               Conread position:
               185-566
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 27
               

               Conread position:
               186-789
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               186-793
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               187-769
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 121
               

               Conread position:
               187-789
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 77
               

               Conread position:
               190-403
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               191-624
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               212-745
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               213-506
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 16
               

               Conread position:
               231-792
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               347
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               231-793
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 73
               

               Conread position:
               232-532
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               278, 40
               

               Conread position:
               232-556
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               127, 58
               

               Conread position:
               232-688
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               311, 38
               

               Conread position:
               232-769
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 67
               

               Conread position:
               232-769
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 487
               

               Conread position:
               232-769
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 55
               

               Conread position:
               232-771
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 81
               

               Conread position:
               232-792
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 59
               

               Conread position:
               232-793
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 70
               

               Conread position:
               237-466
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               238-654
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 199
               

               Conread position:
               238-760
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 66
               

               Conread position:
               238-772
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               261-793
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 43
               

               Conread position:
               261-793
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               363
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               280, 43
               

               Conread position:
               262-475
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               262-767
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 40
               

               Conread position:
               263-793
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 40
               

               Conread position:
               279-775
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 24
               

               Conread position:
               281-779
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               286-789
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 103
               

               Conread position:
               296-793
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 16
               

               Conread position:
               301-539
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               169, 24
               

               Conread position:
               303-775
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 172
               

               Conread position:
               304-720
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               81, 288
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               314
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               193, 66
               

               Conread position:
               314-793
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 151
               

               Conread position:
               314-793
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 396
               

               Conread position:
               325-793
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 152
               

               Conread position:
               417-793
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               126, 64
               

               Conread position:
               425-793
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               448-761
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 9
               

               Conread position:
               457-793
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               87, 46
               
Show alignments to all cow chromosomes.