Cow genome map


           Conread name:
           Thy1-THY010068C08
        

               Conread position:
               1-180
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 99
               

               Conread position:
               5-172
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               174-467
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 117
               

               Conread position:
               176-593
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               176-720
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 40
               

               Conread position:
               176-720
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 539
               

               Conread position:
               177-379
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 135
               

               Conread position:
               177-463
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               177-463
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               177-482
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               177-484
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               60, 98
               

               Conread position:
               177-566
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 131
               

               Conread position:
               177-567
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               59, 92
               

               Conread position:
               177-584
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               333, 58
               

               Conread position:
               177-642
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 130
               

               Conread position:
               177-693
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               177-768
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 47
               

               Conread position:
               177-769
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               177-769
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 49
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 121
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 136
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 123
               

               Conread position:
               177-788
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 130
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 549
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 123
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 58
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 19
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 136
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 134
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               178-498
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               21, 129
               

               Conread position:
               178-767
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 133
               

               Conread position:
               178-772
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 113
               

               Conread position:
               178-772
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 323
               

               Conread position:
               178-793
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 121
               

               Conread position:
               179-533
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               42, 117
               

               Conread position:
               179-699
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 129
               

               Conread position:
               179-793
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 130
               

               Conread position:
               181-491
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               54, 139
               

               Conread position:
               181-652
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 128
               

               Conread position:
               181-789
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               181-793
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 118
               

               Conread position:
               182-510
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               57, 27
               

               Conread position:
               182-663
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 57
               

               Conread position:
               184-728
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               343
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 79
               

               Conread position:
               185-509
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 41
               

               Conread position:
               190-793
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               389
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               319, 57
               

               Conread position:
               191-647
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 103
               

               Conread position:
               199-662
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               201-662
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               206-793
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               231-788
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 72
               

               Conread position:
               232-425
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               232-652
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 70
               

               Conread position:
               232-792
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 71
               

               Conread position:
               237-771
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 63
               

               Conread position:
               238-476
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               238-476
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               141, 61
               

               Conread position:
               238-494
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               238-793
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 247
               

               Conread position:
               240-573
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               249, 20
               

               Conread position:
               242-501
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               276-780
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               325
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               82, 11
               

               Conread position:
               276-789
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               330
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               209, 32
               

               Conread position:
               279-793
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 14
               

               Conread position:
               281-579
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               158, 7
               

               Conread position:
               295-793
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 27
               

               Conread position:
               296-793
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               303-667
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 22
               

               Conread position:
               306-776
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               306
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               316-793
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 164
               

               Conread position:
               320-771
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 193
               

               Conread position:
               329-715
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 60
               

               Conread position:
               350-775
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 359
               

               Conread position:
               373-770
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 20
               

               Conread position:
               395-793
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 80
               

               Conread position:
               427-775
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               92, 61
               

               Conread position:
               469-780
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 106
               

               Conread position:
               579-771
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 130
               
Show alignments to all cow chromosomes.