Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 170-616
Cow position:
Alignm length: 462
Alignm identity: 309
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 65, 105

Conread position: 170-770
Cow position:
Alignm length: 612
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 121

Conread position: 174-767
Cow position:
Alignm length: 600
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 25

Conread position: 176-537
Cow position:
Alignm length: 365
Alignm identity: 245
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 55

Conread position: 177-422
Cow position:
Alignm length: 250
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 141, 181

Conread position: 177-475
Cow position:
Alignm length: 302
Alignm identity: 193
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 55

Conread position: 177-490
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 58, 118

Conread position: 177-500
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 132

Conread position: 177-501
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 41, 65

Conread position: 177-555
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 47

Conread position: 177-574
Cow position:
Alignm length: 408
Alignm identity: 269
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 135

Conread position: 177-611
Cow position:
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 132

Conread position: 177-767
Cow position:
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 134

Conread position: 177-767
Cow position:
Alignm length: 599
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 57

Conread position: 177-768
Cow position:
Alignm length: 610
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 136

Conread position: 177-769
Cow position:
Alignm length: 606
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-769
Cow position:
Alignm length: 615
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 43

Conread position: 177-769
Cow position:
Alignm length: 609
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 28

Conread position: 177-769
Cow position:
Alignm length: 623
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 46

Conread position: 177-769
Cow position:
Alignm length: 608
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 135

Conread position: 177-771
Cow position:
Alignm length: 624
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 65

Conread position: 177-772
Cow position:
Alignm length: 611
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 59

Conread position: 177-772
Cow position:
Alignm length: 612
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 177-772
Cow position:
Alignm length: 614
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 135

Conread position: 177-774
Cow position:
Alignm length: 614
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 137

Conread position: 177-775
Cow position:
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 177-779
Cow position:
Alignm length: 623
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 108

Conread position: 177-793
Cow position:
Alignm length: 640
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 177-793
Cow position:
Alignm length: 625
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 129

Conread position: 177-793
Cow position:
Alignm length: 640
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-793
Cow position:
Alignm length: 646
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 22

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 131

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 135

Conread position: 177-793
Cow position:
Alignm length: 626
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 59

Conread position: 178-401
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 56

Conread position: 178-549
Cow position:
Alignm length: 380
Alignm identity: 245
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 45

Conread position: 178-583
Cow position:
Alignm length: 416
Alignm identity: 275
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 26

Conread position: 178-762
Cow position:
Alignm length: 605
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 132

Conread position: 178-772
Cow position:
Alignm length: 619
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 65

Conread position: 179-711
Cow position:
Alignm length: 547
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 133

Conread position: 179-745
Cow position:
Alignm length: 583
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 130

Conread position: 179-793
Cow position:
Alignm length: 630
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 130

Conread position: 201-772
Cow position:
Alignm length: 582
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 102

Conread position: 205-486
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 45

Conread position: 232-749
Cow position:
Alignm length: 524
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 70

Conread position: 232-769
Cow position:
Alignm length: 547
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 71

Conread position: 232-769
Cow position:
Alignm length: 548
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 30

Conread position: 232-772
Cow position:
Alignm length: 552
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 58

Conread position: 232-793
Cow position:
Alignm length: 570
Alignm identity: 375
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 304, 15

Conread position: 236-473
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 237-576
Cow position:
Alignm length: 351
Alignm identity: 236
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 84, 32

Conread position: 238-761
Cow position:
Alignm length: 532
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 64

Conread position: 238-793
Cow position:
Alignm length: 563
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 65

Conread position: 238-793
Cow position:
Alignm length: 562
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 53

Conread position: 238-793
Cow position:
Alignm length: 562
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 77

Conread position: 239-671
Cow position:
Alignm length: 444
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 61

Conread position: 241-784
Cow position:
Alignm length: 551
Alignm identity: 348
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 140, 31

Conread position: 242-770
Cow position:
Alignm length: 536
Alignm identity: 352
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 295, 27

Conread position: 257-793
Cow position:
Alignm length: 553
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 47

Conread position: 263-549
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 41

Conread position: 270-658
Cow position:
Alignm length: 400
Alignm identity: 277
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 226, 32

Conread position: 272-599
Cow position:
Alignm length: 334
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 233, 31

Conread position: 305-793
Cow position:
Alignm length: 495
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 9

Conread position: 315-793
Cow position:
Alignm length: 485
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 45

Conread position: 325-783
Cow position:
Alignm length: 466
Alignm identity: 286
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 145, 106

Conread position: 468-764
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 31

Conread position: 520-784
Cow position:
Alignm length: 267
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 24

Conread position: 532-793
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 122

Conread position: 578-771
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 54, 128

Conread position: 633-793
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 73

Show alignments to all cow chromosomes.