Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 168-562
Cow position: chr2:27318014-27317631 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 263
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 53, 33

Conread position: 170-721
Cow position: chr2:36052296-36052855 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 143

Conread position: 170-792
Cow position: chr2:4926703-4927309 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 408
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 105

Conread position: 172-593
Cow position: chr2:38013360-38012938 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 269
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 64

Conread position: 174-772
Cow position: chr2:14823794-14823212 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 25

Conread position: 174-793
Cow position: chr2:64580187-64580802 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 99

Conread position: 176-514
Cow position: chr2:49628316-49627973 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 125

Conread position: 177-462
Cow position: chr2:174851-175146 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 135

Conread position: 177-462
Cow position: chr2:574301-574010 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 132

Conread position: 177-474
Cow position: chr2:2381791-2381485 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 131

Conread position: 177-528
Cow position: chr2:63291262-63291616 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 61, 101

Conread position: 177-595
Cow position: chr2:16291158-16290744 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 112

Conread position: 177-613
Cow position: chr2:81257876-81257437 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 60

Conread position: 177-624
Cow position: chr2:211550-212006 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 307
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 53, 136

Conread position: 177-641
Cow position: chr2:25028584-25029048 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 125

Conread position: 177-643
Cow position: chr2:5869673-5870149 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 97

Conread position: 177-683
Cow position: chr2:78743291-78742780 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 127

Conread position: 177-689
Cow position: chr2:24925273-24924749 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 123

Conread position: 177-693
Cow position: chr2:28648894-28649416 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 131

Conread position: 177-701
Cow position: chr2:28640136-28640674 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 89

Conread position: 177-710
Cow position: chr2:9958359-9958905 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-740
Cow position: chr2:54738199-54737618 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 315

Conread position: 177-750
Cow position: chr2:289074-289653 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 139

Conread position: 177-767
Cow position: chr2:3789146-3789716 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 54

Conread position: 177-767
Cow position: chr2:36029662-36030250 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 177-767
Cow position: chr2:47037726-47038306 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 57

Conread position: 177-767
Cow position: chr2:52617183-52616578 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-767
Cow position: chr2:67420240-67420837 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 132

Conread position: 177-769
Cow position: chr2:10185520-10186123 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 59

Conread position: 177-769
Cow position: chr2:13045005-13045598 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 135

Conread position: 177-769
Cow position: chr2:16900967-16900358 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-769
Cow position: chr2:44990594-44991185 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 177-772
Cow position: chr2:2087458-2088070 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 49

Conread position: 177-772
Cow position: chr2:5484300-5484872 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 62

Conread position: 177-772
Cow position: chr2:8119252-8118645 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 133

Conread position: 177-772
Cow position: chr2:10610938-10611528 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 57

Conread position: 177-772
Cow position: chr2:51617961-51617360 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 186

Conread position: 177-772
Cow position: chr2:59412985-59413578 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 40

Conread position: 177-775
Cow position: chr2:19012062-19011447 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 136

Conread position: 177-779
Cow position: chr2:45918847-45919466 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 131

Conread position: 177-779
Cow position: chr2:47811556-47810941 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 131

Conread position: 177-779
Cow position: chr2:50078295-50077696 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 47

Conread position: 177-787
Cow position: chr2:3832481-3833089 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 414
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 49, 101

Conread position: 177-791
Cow position: chr2:1691677-1691057 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 20

Conread position: 177-793
Cow position: chr2:281983-282604 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 133

Conread position: 177-793
Cow position: chr2:53330470-53329843 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 178-498
Cow position: chr2:33088824-33088503 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 46

Conread position: 178-501
Cow position: chr2:16283045-16282731 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 46

Conread position: 178-647
Cow position: chr2:13481961-13482437 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 329
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 80, 58

Conread position: 178-767
Cow position: chr2:41657883-41657283 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 124

Conread position: 178-788
Cow position: chr2:11158415-11159032 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 134

Conread position: 178-789
Cow position: chr2:4402451-4403071 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 38

Conread position: 178-793
Cow position: chr2:3834258-3834876 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 33

Conread position: 179-491
Cow position: chr2:12516484-12516792 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 67, 45

Conread position: 179-584
Cow position: chr2:44934274-44934660 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 269
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 26

Conread position: 179-667
Cow position: chr2:2355734-2356233 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 179-772
Cow position: chr2:9908620-9908016 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 179-793
Cow position: chr2:364362-364977 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 55

Conread position: 179-793
Cow position: chr2:3323855-3324478 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 180-776
Cow position: chr2:5888941-5889523 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 387
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 48, 131

Conread position: 181-660
Cow position: chr2:42670001-42670490 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 114

Conread position: 181-683
Cow position: chr2:35356721-35356188 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 131

Conread position: 181-793
Cow position: chr2:24147567-24146947 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 131

Conread position: 182-755
Cow position: chr2:39422327-39421740 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 120

Conread position: 184-682
Cow position: chr2:44649981-44649494 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 342
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 39

Conread position: 185-503
Cow position: chr2:40453606-40453293 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 37, 122

Conread position: 185-682
Cow position: chr2:78763347-78762846 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 13

Conread position: 186-793
Cow position: chr2:15576139-15576751 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 152

Conread position: 187-771
Cow position: chr2:43961394-43960811 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 127

Conread position: 191-771
Cow position: chr2:14777167-14777720 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 120

Conread position: 191-787
Cow position: chr2:66307427-66308020 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 36

Conread position: 203-754
Cow position: chr2:32656334-32655790 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 33

Conread position: 231-479
Cow position: chr2:3970634-3970390 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 69

Conread position: 232-595
Cow position: chr2:55483501-55483846 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 332, 79

Conread position: 232-647
Cow position: chr2:5903674-5904090 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 72

Conread position: 232-754
Cow position: chr2:74857860-74857344 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 34

Conread position: 232-788
Cow position: chr2:22078433-22077872 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 72

Conread position: 232-793
Cow position: chr2:7903679-7903121 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 63

Conread position: 232-793
Cow position: chr2:36981025-36980463 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 72

Conread position: 232-793
Cow position: chr2:41173312-41172753 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 58

Conread position: 238-464
Cow position: chr2:36277752-36277975 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 67

Conread position: 238-490
Cow position: chr2:51998281-51998538 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 66, 91

Conread position: 238-520
Cow position: chr2:46617070-46616814 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 206, 24

Conread position: 240-498
Cow position: chr2:2451828-2451578 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 64, 0

Conread position: 242-640
Cow position: chr2:46931849-46932246 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 34

Conread position: 262-444
Cow position: chr2:766878-767068 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 30

Conread position: 262-643
Cow position: chr2:45964503-45964884 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 7

Conread position: 274-574
Cow position: chr2:64769087-64769389 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 51

Conread position: 275-792
Cow position: chr2:29030732-29030233 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 11

Conread position: 276-769
Cow position: chr2:80292360-80292846 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 27

Conread position: 277-663
Cow position: chr2:62794940-62794561 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 49

Conread position: 280-793
Cow position: chr2:73193698-73193198 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 23

Conread position: 281-776
Cow position: chr2:10732165-10732673 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 430

Conread position: 289-779
Cow position: chr2:780856-781344 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 7

Conread position: 302-775
Cow position: chr2:12223736-12224202 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 12

Conread position: 304-483
Cow position: chr2:194970-195146 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 318-772
Cow position: chr2:57335758-57335299 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 323

Conread position: 343-752
Cow position: chr2:5862171-5862590 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 278
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 176, 264

Conread position: 378-793
Cow position: chr2:81750615-81751028 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 278
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 6, 249

Conread position: 427-747
Cow position: chr2:45967536-45967846 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 41

Conread position: 447-779
Cow position: chr2:36992681-36992340 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 265

Conread position: 502-767
Cow position: chr2:16281674-16281418 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 43

Conread position: 523-772
Cow position: chr2:63291745-63291996 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 21, 78

Conread position: 538-762
Cow position: chr2:20920082-20920301 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 80

Show alignments to all cow chromosomes.