Cow genome map
| Conread name: | Thy1-THY010068C08 |
| Conread position: | 171-765 |
| Cow position: | chr20:19355991-19355406 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 177-403 |
| Cow position: | chr20:13663828-13664051 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 112, 47 |
| Conread position: | 177-501 |
| Cow position: | chr20:5229288-5229611 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 53, 104 |
| Conread position: | 177-530 |
| Cow position: | chr20:5466261-5465915 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 136 |
| Conread position: | 177-681 |
| Cow position: | chr20:19050325-19050826 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 177-745 |
| Cow position: | chr20:32349494-32348917 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 157 |
| Conread position: | 177-748 |
| Cow position: | chr20:18314120-18314692 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 263 |
| Conread position: | 177-767 |
| Cow position: | chr20:823997-823388 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 177-767 |
| Cow position: | chr20:19439141-19438553 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 133 |
| Conread position: | 177-771 |
| Cow position: | chr20:10839499-10840087 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 177-775 |
| Cow position: | chr20:12569748-12569140 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 177-775 |
| Cow position: | chr20:27870430-27869822 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 125 |
| Conread position: | 177-775 |
| Cow position: | chr20:28564356-28564972 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 46 |
| Conread position: | 177-779 |
| Cow position: | chr20:8216739-8216135 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 177-779 |
| Cow position: | chr20:15293216-15292619 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 47 |
| Conread position: | 177-793 |
| Cow position: | chr20:5536163-5535539 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 156 |
| Conread position: | 177-793 |
| Cow position: | chr20:13678820-13679439 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 177-793 |
| Cow position: | chr20:13764128-13763508 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 177-793 |
| Cow position: | chr20:14869731-14870348 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 127 |
| Conread position: | 178-700 |
| Cow position: | chr20:10101474-10102003 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 178-767 |
| Cow position: | chr20:8973594-8974189 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 178-793 |
| Cow position: | chr20:37581440-37580812 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 99 |
| Conread position: | 181-454 |
| Cow position: | chr20:27896829-27897102 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 11, 103 |
| Conread position: | 181-793 |
| Cow position: | chr20:23468440-23469062 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 181-793 |
| Cow position: | chr20:35125716-35125100 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 182-793 |
| Cow position: | chr20:29949739-29949103 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 547 |
| Conread position: | 184-661 |
| Cow position: | chr20:7083192-7083674 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 116 |
| Conread position: | 185-499 |
| Cow position: | chr20:5791557-5791257 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 73, 51 |
| Conread position: | 185-787 |
| Cow position: | chr20:35106010-35105368 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 462 |
| Conread position: | 188-793 |
| Cow position: | chr20:38351887-38351273 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 119 |
| Conread position: | 190-793 |
| Cow position: | chr20:10854135-10854748 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 192-793 |
| Cow position: | chr20:15096672-15097274 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 9 |
| Conread position: | 199-772 |
| Cow position: | chr20:19884671-19884105 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 231-787 |
| Cow position: | chr20:2399797-2399242 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 365 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 232-477 |
| Cow position: | chr20:20410392-20410627 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 232-658 |
| Cow position: | chr20:28304050-28303634 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 73 |
| Conread position: | 237-647 |
| Cow position: | chr20:21395089-21394675 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 66 |
| Conread position: | 239-596 |
| Cow position: | chr20:871831-872162 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 65 |
| Conread position: | 239-758 |
| Cow position: | chr20:24615710-24616233 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 262-677 |
| Cow position: | chr20:31497965-31498373 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 262-793 |
| Cow position: | chr20:13433469-13433985 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 147 |
| Conread position: | 266-681 |
| Cow position: | chr20:16105410-16105827 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 36 |
| Conread position: | 330-766 |
| Cow position: | chr20:9127665-9128096 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 184, 60 |
| Conread position: | 350-775 |
| Cow position: | chr20:21915366-21914937 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 117 |
| Conread position: | 417-769 |
| Cow position: | chr20:37442316-37442681 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 140 |
Show alignments to all cow chromosomes.