Cow genome map


           Conread name:
           Thy1-THY010068C08
        

               Conread position:
               168-760
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               177-465
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               53, 86
               

               Conread position:
               177-473
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               177-652
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               177-685
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 120
               

               Conread position:
               177-693
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 123
               

               Conread position:
               177-767
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               177-769
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 106
               

               Conread position:
               177-771
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 109
               

               Conread position:
               177-775
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 132
               

               Conread position:
               177-776
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 24
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               177-789
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 65
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 131
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 392
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 248
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 110
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               178-510
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 128
               

               Conread position:
               178-770
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 134
               

               Conread position:
               178-793
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 101
               

               Conread position:
               179-367
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               179-452
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               54, 121
               

               Conread position:
               179-793
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 55
               

               Conread position:
               181-391
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 124
               

               Conread position:
               181-568
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               266
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               44, 98
               

               Conread position:
               181-793
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 137
               

               Conread position:
               182-510
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               182-767
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 127
               

               Conread position:
               186-689
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 526
               

               Conread position:
               187-472
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 36
               

               Conread position:
               187-556
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               189-767
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 117
               

               Conread position:
               204-476
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               48, 97
               

               Conread position:
               204-695
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 24
               

               Conread position:
               231-468
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               120, 73
               

               Conread position:
               231-483
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               232-489
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               71, 107
               

               Conread position:
               232-501
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               147, 19
               

               Conread position:
               232-593
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 71
               

               Conread position:
               232-660
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 385
               

               Conread position:
               232-769
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 169
               

               Conread position:
               232-793
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               235-688
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 36
               

               Conread position:
               238-453
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               238-466
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               177, 12
               

               Conread position:
               238-793
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 64
               

               Conread position:
               241-789
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               343
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               242-791
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               343
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               140, 58
               

               Conread position:
               259-750
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               234, 34
               

               Conread position:
               262-700
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 49
               

               Conread position:
               262-793
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 41
               

               Conread position:
               263-779
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 38
               

               Conread position:
               266-620
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               244, 29
               

               Conread position:
               274-536
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               304-793
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 22
               

               Conread position:
               309-793
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               315-720
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 231
               

               Conread position:
               318-741
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 63
               

               Conread position:
               325-501
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               350-691
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 130
               

               Conread position:
               393-793
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               121, 66
               

               Conread position:
               397-793
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 295
               

               Conread position:
               458-745
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 182
               

               Conread position:
               471-769
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               43, 200
               

               Conread position:
               522-772
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               539-793
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               545-793
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 68
               
Show alignments to all cow chromosomes.