Cow genome map


           Conread name:
           Thy1-THY010068C08
        

               Conread position:
               174-485
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 84
               

               Conread position:
               176-792
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 86
               

               Conread position:
               176-792
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 140
               

               Conread position:
               176-793
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               176-793
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 40
               

               Conread position:
               177-349
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               177-379
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 130
               

               Conread position:
               177-585
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               177-636
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 136
               

               Conread position:
               177-685
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 135
               

               Conread position:
               177-752
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               177-757
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 135
               

               Conread position:
               177-760
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               177-767
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 317
               

               Conread position:
               177-767
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 89
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 123
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 130
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 47
               

               Conread position:
               177-775
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 134
               

               Conread position:
               177-775
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 59
               

               Conread position:
               177-775
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 123
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 185
               

               Conread position:
               177-779
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 127
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               178-759
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 138
               

               Conread position:
               178-764
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               178-793
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 121
               

               Conread position:
               179-772
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               179-793
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 130
               

               Conread position:
               180-379
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               180-739
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               371
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               181-550
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               53, 130
               

               Conread position:
               181-590
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               181-793
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 128
               

               Conread position:
               182-745
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               379
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               86, 44
               

               Conread position:
               182-767
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 130
               

               Conread position:
               182-767
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 129
               

               Conread position:
               185-684
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               185-767
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 127
               

               Conread position:
               185-767
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               187-764
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               365
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               29, 132
               

               Conread position:
               189-791
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               201-378
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 104
               

               Conread position:
               203-551
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               114, 33
               

               Conread position:
               205-769
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               207-696
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 101
               

               Conread position:
               232-377
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               90, 67
               

               Conread position:
               232-582
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               85, 120
               

               Conread position:
               232-595
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 169
               

               Conread position:
               232-656
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 59
               

               Conread position:
               232-662
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               292
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               332, 61
               

               Conread position:
               232-685
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 54
               

               Conread position:
               232-769
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 432
               

               Conread position:
               232-793
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 71
               

               Conread position:
               237-779
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 32
               

               Conread position:
               238-453
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               238-688
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 76
               

               Conread position:
               238-772
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 62
               

               Conread position:
               238-772
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 247
               

               Conread position:
               238-793
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 53
               

               Conread position:
               238-793
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 369
               

               Conread position:
               239-793
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 329
               

               Conread position:
               243-498
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               90, 51
               

               Conread position:
               251-688
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               262-642
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 41
               

               Conread position:
               305-793
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               264, 27
               

               Conread position:
               314-788
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 100
               

               Conread position:
               315-751
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               294
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               100, 74
               

               Conread position:
               329-748
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 92
               

               Conread position:
               329-762
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               240, 105
               

               Conread position:
               333-789
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 11
               

               Conread position:
               348-772
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               408-766
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               103, 154
               

               Conread position:
               439-793
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 270
               

               Conread position:
               486-779
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               530-737
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 143
               
Show alignments to all cow chromosomes.