Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 145-793
Cow position:
Alignm length: 658
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 204

Conread position: 169-527
Cow position:
Alignm length: 370
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 144

Conread position: 170-630
Cow position:
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 85

Conread position: 172-532
Cow position:
Alignm length: 371
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 140

Conread position: 174-483
Cow position:
Alignm length: 316
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 38

Conread position: 174-508
Cow position:
Alignm length: 338
Alignm identity: 219
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 101

Conread position: 176-494
Cow position:
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 177-492
Cow position:
Alignm length: 323
Alignm identity: 211
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 58, 123

Conread position: 177-526
Cow position:
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 47

Conread position: 177-552
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 76

Conread position: 177-561
Cow position:
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 50

Conread position: 177-593
Cow position:
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 49

Conread position: 177-602
Cow position:
Alignm length: 440
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 135

Conread position: 177-653
Cow position:
Alignm length: 482
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 59

Conread position: 177-673
Cow position:
Alignm length: 521
Alignm identity: 344
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 58, 94

Conread position: 177-686
Cow position:
Alignm length: 515
Alignm identity: 320
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 24

Conread position: 177-756
Cow position:
Alignm length: 595
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 127

Conread position: 177-761
Cow position:
Alignm length: 603
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 440

Conread position: 177-762
Cow position:
Alignm length: 602
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 47

Conread position: 177-775
Cow position:
Alignm length: 613
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 134

Conread position: 177-779
Cow position:
Alignm length: 620
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 300

Conread position: 177-779
Cow position:
Alignm length: 616
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 121

Conread position: 177-793
Cow position:
Alignm length: 631
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 177-793
Cow position:
Alignm length: 634
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 125

Conread position: 177-793
Cow position:
Alignm length: 629
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 119

Conread position: 177-793
Cow position:
Alignm length: 640
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 180

Conread position: 178-720
Cow position:
Alignm length: 556
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 122

Conread position: 178-788
Cow position:
Alignm length: 624
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 131

Conread position: 178-793
Cow position:
Alignm length: 630
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 240

Conread position: 179-592
Cow position:
Alignm length: 429
Alignm identity: 286
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 55, 238

Conread position: 179-641
Cow position:
Alignm length: 477
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 181-779
Cow position:
Alignm length: 619
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 83

Conread position: 181-793
Cow position:
Alignm length: 631
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 83

Conread position: 181-793
Cow position:
Alignm length: 637
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 182-779
Cow position:
Alignm length: 613
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 116

Conread position: 185-760
Cow position:
Alignm length: 592
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 187-767
Cow position:
Alignm length: 597
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 122

Conread position: 193-534
Cow position:
Alignm length: 347
Alignm identity: 237
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 53, 41

Conread position: 193-793
Cow position:
Alignm length: 610
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 108

Conread position: 205-411
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 219-614
Cow position:
Alignm length: 401
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 253, 56

Conread position: 232-491
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 91, 71

Conread position: 232-660
Cow position:
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 68

Conread position: 232-767
Cow position:
Alignm length: 549
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 133

Conread position: 232-768
Cow position:
Alignm length: 544
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 71

Conread position: 232-771
Cow position:
Alignm length: 548
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 28

Conread position: 232-771
Cow position:
Alignm length: 544
Alignm identity: 353
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 314, 68

Conread position: 232-793
Cow position:
Alignm length: 569
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 70

Conread position: 237-602
Cow position:
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 66

Conread position: 238-789
Cow position:
Alignm length: 556
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 64

Conread position: 265-463
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 38

Conread position: 270-503
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 33

Conread position: 272-486
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 277-793
Cow position:
Alignm length: 522
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 32

Conread position: 317-767
Cow position:
Alignm length: 458
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 156

Conread position: 321-685
Cow position:
Alignm length: 369
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 198, 87

Conread position: 343-685
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 168, 116

Conread position: 353-793
Cow position:
Alignm length: 448
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 111

Conread position: 374-793
Cow position:
Alignm length: 428
Alignm identity: 280
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 88, 173

Conread position: 425-793
Cow position:
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 85

Conread position: 630-793
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 59

Show alignments to all cow chromosomes.