Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 174-658
Cow position: chr24:6332440-6332933 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 133

Conread position: 174-791
Cow position: chr24:14349439-14348834 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 389
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 132

Conread position: 175-793
Cow position: chr24:36558527-36559127 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 176-760
Cow position: chr24:38638788-38638204 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 109

Conread position: 176-793
Cow position: chr24:33934642-33934002 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 406

Conread position: 177-413
Cow position: chr24:6668565-6668794 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 25

Conread position: 177-461
Cow position: chr24:17370720-17370996 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 102

Conread position: 177-474
Cow position: chr24:17321966-17321654 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 177-493
Cow position: chr24:1450681-1450375 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 226

Conread position: 177-501
Cow position: chr24:6142339-6142019 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 133

Conread position: 177-694
Cow position: chr24:6407287-6406756 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 132

Conread position: 177-763
Cow position: chr24:13233510-13232910 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 310

Conread position: 177-768
Cow position: chr24:6085315-6084720 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-769
Cow position: chr24:19702750-19702137 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 223

Conread position: 177-770
Cow position: chr24:5991973-5992574 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 134

Conread position: 177-772
Cow position: chr24:6435735-6435127 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 133

Conread position: 177-775
Cow position: chr24:4414281-4414886 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 131

Conread position: 177-793
Cow position: chr24:6023853-6024476 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 177-793
Cow position: chr24:7089715-7090337 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 177-793
Cow position: chr24:12087461-12086832 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 135

Conread position: 177-793
Cow position: chr24:12109451-12110074 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 95

Conread position: 177-793
Cow position: chr24:22972345-22971722 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 135

Conread position: 177-793
Cow position: chr24:29188545-29187918 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 131

Conread position: 177-793
Cow position: chr24:31006183-31006774 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 392
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 141

Conread position: 178-408
Cow position: chr24:35840811-35841052 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 158

Conread position: 178-634
Cow position: chr24:12150060-12150532 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 299
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 71

Conread position: 178-696
Cow position: chr24:12128811-12129341 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 46

Conread position: 178-779
Cow position: chr24:8151035-8151618 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 57

Conread position: 178-793
Cow position: chr24:12334505-12335131 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 122

Conread position: 179-474
Cow position: chr24:13044391-13044681 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 200, 54

Conread position: 179-641
Cow position: chr24:6327779-6328251 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 121

Conread position: 179-793
Cow position: chr24:12699567-12700190 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 55

Conread position: 179-793
Cow position: chr24:29305063-29305693 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 121

Conread position: 179-793
Cow position: chr24:44018758-44018162 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 54

Conread position: 180-506
Cow position: chr24:6130076-6129754 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 127

Conread position: 181-536
Cow position: chr24:14881361-14881707 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 45

Conread position: 181-793
Cow position: chr24:6060147-6059527 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 130

Conread position: 181-793
Cow position: chr24:19834645-19834021 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 127

Conread position: 185-726
Cow position: chr24:40656289-40655746 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 82

Conread position: 185-793
Cow position: chr24:9187498-9188106 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 49

Conread position: 193-793
Cow position: chr24:23504631-23505237 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 111

Conread position: 206-508
Cow position: chr24:16097770-16097471 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 31, 64

Conread position: 232-697
Cow position: chr24:37199821-37200283 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 73

Conread position: 232-759
Cow position: chr24:19324263-19324779 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 340
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 26, 65

Conread position: 232-763
Cow position: chr24:12205116-12205652 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 79

Conread position: 232-793
Cow position: chr24:9545253-9544692 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 57

Conread position: 232-793
Cow position: chr24:17695792-17696343 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 70

Conread position: 237-397
Cow position: chr24:35869370-35869527 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 238-594
Cow position: chr24:40975522-40975873 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 148, 64

Conread position: 238-779
Cow position: chr24:147428-147968 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 57

Conread position: 241-792
Cow position: chr24:36709553-36708990 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 321

Conread position: 242-767
Cow position: chr24:14389358-14389879 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 249-582
Cow position: chr24:43060465-43060143 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 295, 73

Conread position: 250-779
Cow position: chr24:6049724-6049220 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 80

Conread position: 290-513
Cow position: chr24:27147843-27147623 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 292-602
Cow position: chr24:11866116-11866428 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 30

Conread position: 292-791
Cow position: chr24:12143206-12143705 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 97

Conread position: 304-512
Cow position: chr24:14754793-14754585 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 304-753
Cow position: chr24:13322279-13321839 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 293
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 141, 86

Conread position: 315-793
Cow position: chr24:12163021-12162551 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 208

Conread position: 319-772
Cow position: chr24:43814870-43814413 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 158

Conread position: 323-785
Cow position: chr24:6344072-6343611 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 285
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 215, 5

Conread position: 326-629
Cow position: chr24:29183250-29182944 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 330-768
Cow position: chr24:6476031-6475590 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 291
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 180, 137

Conread position: 373-768
Cow position: chr24:14383542-14383933 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 26

Conread position: 391-760
Cow position: chr24:28210045-28210421 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 255
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 87, 353

Conread position: 519-771
Cow position: chr24:6538860-6538609 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 87

Conread position: 535-793
Cow position: chr24:37064111-37064362 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 26

Conread position: 572-793
Cow position: chr24:14754147-14754371 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 135

Show alignments to all cow chromosomes.