Cow genome map
Conread name: | Thy1-THY010068C08 |
Conread position: | 174-658 |
Cow position: | chr24:6332440-6332933 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 133 |
Conread position: | 174-791 |
Cow position: | chr24:14349439-14348834 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 389 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 59, 132 |
Conread position: | 175-793 |
Cow position: | chr24:36558527-36559127 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 15 |
Conread position: | 176-760 |
Cow position: | chr24:38638788-38638204 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 109 |
Conread position: | 176-793 |
Cow position: | chr24:33934642-33934002 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 406 |
Conread position: | 177-413 |
Cow position: | chr24:6668565-6668794 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 161 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 18, 25 |
Conread position: | 177-461 |
Cow position: | chr24:17370720-17370996 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 203 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 62, 102 |
Conread position: | 177-474 |
Cow position: | chr24:17321966-17321654 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 211 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 177-493 |
Cow position: | chr24:1450681-1450375 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 217 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 73, 226 |
Conread position: | 177-501 |
Cow position: | chr24:6142339-6142019 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 220 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 44, 133 |
Conread position: | 177-694 |
Cow position: | chr24:6407287-6406756 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 132 |
Conread position: | 177-763 |
Cow position: | chr24:13233510-13232910 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 310 |
Conread position: | 177-768 |
Cow position: | chr24:6085315-6084720 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 134 |
Conread position: | 177-769 |
Cow position: | chr24:19702750-19702137 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 223 |
Conread position: | 177-770 |
Cow position: | chr24:5991973-5992574 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 134 |
Conread position: | 177-772 |
Cow position: | chr24:6435735-6435127 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 133 |
Conread position: | 177-775 |
Cow position: | chr24:4414281-4414886 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 131 |
Conread position: | 177-793 |
Cow position: | chr24:6023853-6024476 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 134 |
Conread position: | 177-793 |
Cow position: | chr24:7089715-7090337 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 106 |
Conread position: | 177-793 |
Cow position: | chr24:12087461-12086832 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 135 |
Conread position: | 177-793 |
Cow position: | chr24:12109451-12110074 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 95 |
Conread position: | 177-793 |
Cow position: | chr24:22972345-22971722 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 135 |
Conread position: | 177-793 |
Cow position: | chr24:29188545-29187918 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 177-793 |
Cow position: | chr24:31006183-31006774 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 392 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 53, 141 |
Conread position: | 178-408 |
Cow position: | chr24:35840811-35841052 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 168 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 55, 158 |
Conread position: | 178-634 |
Cow position: | chr24:12150060-12150532 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 299 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 52, 71 |
Conread position: | 178-696 |
Cow position: | chr24:12128811-12129341 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 46 |
Conread position: | 178-779 |
Cow position: | chr24:8151035-8151618 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 57 |
Conread position: | 178-793 |
Cow position: | chr24:12334505-12335131 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 122 |
Conread position: | 179-474 |
Cow position: | chr24:13044391-13044681 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 206 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 200, 54 |
Conread position: | 179-641 |
Cow position: | chr24:6327779-6328251 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 121 |
Conread position: | 179-793 |
Cow position: | chr24:12699567-12700190 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 55 |
Conread position: | 179-793 |
Cow position: | chr24:29305063-29305693 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 121 |
Conread position: | 179-793 |
Cow position: | chr24:44018758-44018162 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 291, 54 |
Conread position: | 180-506 |
Cow position: | chr24:6130076-6129754 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 242 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 53, 127 |
Conread position: | 181-536 |
Cow position: | chr24:14881361-14881707 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 246 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 51, 45 |
Conread position: | 181-793 |
Cow position: | chr24:6060147-6059527 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 130 |
Conread position: | 181-793 |
Cow position: | chr24:19834645-19834021 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 127 |
Conread position: | 185-726 |
Cow position: | chr24:40656289-40655746 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 82 |
Conread position: | 185-793 |
Cow position: | chr24:9187498-9188106 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 49 |
Conread position: | 193-793 |
Cow position: | chr24:23504631-23505237 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 111 |
Conread position: | 206-508 |
Cow position: | chr24:16097770-16097471 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 213 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 31, 64 |
Conread position: | 232-697 |
Cow position: | chr24:37199821-37200283 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 73 |
Conread position: | 232-759 |
Cow position: | chr24:19324263-19324779 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 340 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 26, 65 |
Conread position: | 232-763 |
Cow position: | chr24:12205116-12205652 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 279, 79 |
Conread position: | 232-793 |
Cow position: | chr24:9545253-9544692 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 57 |
Conread position: | 232-793 |
Cow position: | chr24:17695792-17696343 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 70 |
Conread position: | 237-397 |
Cow position: | chr24:35869370-35869527 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 117 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 238-594 |
Cow position: | chr24:40975522-40975873 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 232 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 148, 64 |
Conread position: | 238-779 |
Cow position: | chr24:147428-147968 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 57 |
Conread position: | 241-792 |
Cow position: | chr24:36709553-36708990 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 321 |
Conread position: | 242-767 |
Cow position: | chr24:14389358-14389879 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 23 |
Conread position: | 249-582 |
Cow position: | chr24:43060465-43060143 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 225 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 295, 73 |
Conread position: | 250-779 |
Cow position: | chr24:6049724-6049220 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 80 |
Conread position: | 290-513 |
Cow position: | chr24:27147843-27147623 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 166 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 292-602 |
Cow position: | chr24:11866116-11866428 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 30 |
Conread position: | 292-791 |
Cow position: | chr24:12143206-12143705 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 97 |
Conread position: | 304-512 |
Cow position: | chr24:14754793-14754585 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 154 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 304-753 |
Cow position: | chr24:13322279-13321839 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 293 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 141, 86 |
Conread position: | 315-793 |
Cow position: | chr24:12163021-12162551 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 208 |
Conread position: | 319-772 |
Cow position: | chr24:43814870-43814413 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 158 |
Conread position: | 323-785 |
Cow position: | chr24:6344072-6343611 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 285 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 215, 5 |
Conread position: | 326-629 |
Cow position: | chr24:29183250-29182944 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 0 |
Conread position: | 330-768 |
Cow position: | chr24:6476031-6475590 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 291 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 180, 137 |
Conread position: | 373-768 |
Cow position: | chr24:14383542-14383933 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 26 |
Conread position: | 391-760 |
Cow position: | chr24:28210045-28210421 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 255 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 87, 353 |
Conread position: | 519-771 |
Cow position: | chr24:6538860-6538609 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 172 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 22, 87 |
Conread position: | 535-793 |
Cow position: | chr24:37064111-37064362 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 177 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 19, 26 |
Conread position: | 572-793 |
Cow position: | chr24:14754147-14754371 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 152 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 57, 135 |
Show alignments to all cow chromosomes.