Cow genome map


           Conread name:
           Thy1-THY010068C08
        

               Conread position:
               174-658
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 133
               

               Conread position:
               174-791
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               389
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               59, 132
               

               Conread position:
               175-793
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               176-760
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 109
               

               Conread position:
               176-793
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 406
               

               Conread position:
               177-413
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               177-461
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               177-474
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               177-493
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 226
               

               Conread position:
               177-501
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               44, 133
               

               Conread position:
               177-694
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               177-763
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 310
               

               Conread position:
               177-768
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               177-769
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 223
               

               Conread position:
               177-770
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 134
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 133
               

               Conread position:
               177-775
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 131
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 134
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 106
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 135
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 95
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 135
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 131
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               392
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               178-408
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               55, 158
               

               Conread position:
               178-634
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               178-696
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 46
               

               Conread position:
               178-779
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 57
               

               Conread position:
               178-793
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 122
               

               Conread position:
               179-474
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               200, 54
               

               Conread position:
               179-641
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 121
               

               Conread position:
               179-793
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 55
               

               Conread position:
               179-793
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 121
               

               Conread position:
               179-793
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 54
               

               Conread position:
               180-506
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               181-536
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               51, 45
               

               Conread position:
               181-793
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 130
               

               Conread position:
               181-793
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 127
               

               Conread position:
               185-726
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               185-793
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 49
               

               Conread position:
               193-793
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 111
               

               Conread position:
               206-508
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               31, 64
               

               Conread position:
               232-697
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               232-759
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               340
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               26, 65
               

               Conread position:
               232-763
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 79
               

               Conread position:
               232-793
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 57
               

               Conread position:
               232-793
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 70
               

               Conread position:
               237-397
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               238-594
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               148, 64
               

               Conread position:
               238-779
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 57
               

               Conread position:
               241-792
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 321
               

               Conread position:
               242-767
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               249-582
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               295, 73
               

               Conread position:
               250-779
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 80
               

               Conread position:
               290-513
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               292-602
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 30
               

               Conread position:
               292-791
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 97
               

               Conread position:
               304-512
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-753
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               293
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               141, 86
               

               Conread position:
               315-793
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 208
               

               Conread position:
               319-772
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 158
               

               Conread position:
               323-785
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               215, 5
               

               Conread position:
               326-629
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               330-768
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               291
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               180, 137
               

               Conread position:
               373-768
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               391-760
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               87, 353
               

               Conread position:
               519-771
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               22, 87
               

               Conread position:
               535-793
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               572-793
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               57, 135
               
Show alignments to all cow chromosomes.