Cow genome map
| Conread name: | Thy1-THY010068C08 |
| Conread position: | 170-767 |
| Cow position: | chr27:16033229-16033825 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 170-793 |
| Cow position: | chr27:27415055-27414413 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 140 |
| Conread position: | 176-379 |
| Cow position: | chr27:21286721-21286931 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 176-775 |
| Cow position: | chr27:26326245-26325634 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 123 |
| Conread position: | 177-413 |
| Cow position: | chr27:27664170-27663926 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 177-494 |
| Cow position: | chr27:27751926-27752264 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 47 |
| Conread position: | 177-680 |
| Cow position: | chr27:15636177-15636690 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 177-769 |
| Cow position: | chr27:9330901-9330295 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 177-792 |
| Cow position: | chr27:3234366-3234992 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 381 |
| Conread position: | 177-793 |
| Cow position: | chr27:1210522-1209899 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 177-793 |
| Cow position: | chr27:14459277-14459907 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 179-793 |
| Cow position: | chr27:11095972-11095350 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 130 |
| Conread position: | 181-468 |
| Cow position: | chr27:1677417-1677698 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 181-501 |
| Cow position: | chr27:1848177-1848490 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 185-516 |
| Cow position: | chr27:22149988-22149650 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 188-745 |
| Cow position: | chr27:30273044-30273613 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 232-779 |
| Cow position: | chr27:27507259-27506696 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 43 |
| Conread position: | 232-793 |
| Cow position: | chr27:9992094-9992653 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 71 |
| Conread position: | 233-402 |
| Cow position: | chr27:25058022-25057857 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 236-747 |
| Cow position: | chr27:27905966-27905460 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 313 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 7, 78 |
| Conread position: | 243-647 |
| Cow position: | chr27:17319407-17319799 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 116, 29 |
| Conread position: | 292-793 |
| Cow position: | chr27:26554625-26555117 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 30 |
| Conread position: | 305-728 |
| Cow position: | chr27:16089046-16089480 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 205, 18 |
| Conread position: | 322-581 |
| Cow position: | chr27:16551463-16551218 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 215, 87 |
| Conread position: | 343-549 |
| Cow position: | chr27:25803901-25804109 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 354-625 |
| Cow position: | chr27:20135066-20135348 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 356-793 |
| Cow position: | chr27:22673321-22672882 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 295 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 166, 57 |
| Conread position: | 424-772 |
| Cow position: | chr27:3643332-3643670 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 34 |
| Conread position: | 429-775 |
| Cow position: | chr27:27663879-27663533 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 513-793 |
| Cow position: | chr27:894041-893757 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 33, 195 |
| Conread position: | 514-772 |
| Cow position: | chr27:15123760-15123497 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 168 |
Show alignments to all cow chromosomes.