Cow genome map
Conread name: | Thy1-THY010068C08 |
Conread position: | 170-420 |
Cow position: | chr28:6457114-6457357 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 164 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 170-497 |
Cow position: | chr28:28440034-28439705 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 221 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 65, 143 |
Conread position: | 176-430 |
Cow position: | chr28:10470721-10470464 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 174 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 60, 121 |
Conread position: | 176-793 |
Cow position: | chr28:8684519-8685125 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 157 |
Conread position: | 177-426 |
Cow position: | chr28:7028574-7028815 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 177 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 209, 65 |
Conread position: | 177-466 |
Cow position: | chr28:27678758-27678471 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 199 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 39, 136 |
Conread position: | 177-501 |
Cow position: | chr28:14232717-14233053 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 242 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 56, 128 |
Conread position: | 177-513 |
Cow position: | chr28:5799508-5799170 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 238 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 59, 34 |
Conread position: | 177-557 |
Cow position: | chr28:10460394-10460776 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 119 |
Conread position: | 177-582 |
Cow position: | chr28:9179828-9179428 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 57 |
Conread position: | 177-611 |
Cow position: | chr28:6231557-6231999 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 115 |
Conread position: | 177-621 |
Cow position: | chr28:29760714-29761166 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 132 |
Conread position: | 177-627 |
Cow position: | chr28:24883770-24884221 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 57 |
Conread position: | 177-652 |
Cow position: | chr28:8380279-8379787 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 123 |
Conread position: | 177-671 |
Cow position: | chr28:10580874-10581376 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 135 |
Conread position: | 177-767 |
Cow position: | chr28:21360707-21360095 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 317 |
Conread position: | 177-768 |
Cow position: | chr28:26425039-26425632 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 124 |
Conread position: | 177-769 |
Cow position: | chr28:1506082-1505483 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 123 |
Conread position: | 177-769 |
Cow position: | chr28:10072488-10071892 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 132 |
Conread position: | 177-769 |
Cow position: | chr28:22259936-22260538 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 123 |
Conread position: | 177-775 |
Cow position: | chr28:3191040-3191644 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 135 |
Conread position: | 177-775 |
Cow position: | chr28:5938699-5938091 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 134 |
Conread position: | 177-775 |
Cow position: | chr28:7741657-7741082 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 47 |
Conread position: | 177-775 |
Cow position: | chr28:13461191-13460579 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 571 |
Conread position: | 177-776 |
Cow position: | chr28:17666091-17666696 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 135 |
Conread position: | 177-779 |
Cow position: | chr28:12151522-12150908 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 142 |
Conread position: | 177-793 |
Cow position: | chr28:1166664-1167288 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 113 |
Conread position: | 177-793 |
Cow position: | chr28:5750492-5751115 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 123 |
Conread position: | 177-793 |
Cow position: | chr28:18519236-18519856 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 122 |
Conread position: | 178-455 |
Cow position: | chr28:15034909-15035185 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 194 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 144, 46 |
Conread position: | 178-500 |
Cow position: | chr28:2987873-2988197 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 139 |
Conread position: | 178-769 |
Cow position: | chr28:29821210-29820618 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 122 |
Conread position: | 179-444 |
Cow position: | chr28:1954567-1954296 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 183 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 55, 130 |
Conread position: | 179-774 |
Cow position: | chr28:484382-484982 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 248 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 54, 122 |
Conread position: | 179-793 |
Cow position: | chr28:6538051-6538674 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 131 |
Conread position: | 179-793 |
Cow position: | chr28:14751757-14751133 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 131 |
Conread position: | 181-438 |
Cow position: | chr28:22042076-22042327 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 177 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 181-695 |
Cow position: | chr28:33246868-33247394 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 356 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 18, 75 |
Conread position: | 181-752 |
Cow position: | chr28:7811649-7811094 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 384 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 26, 16 |
Conread position: | 181-767 |
Cow position: | chr28:24590068-24589467 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 307 |
Conread position: | 181-768 |
Cow position: | chr28:1386186-1386784 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 77 |
Conread position: | 181-793 |
Cow position: | chr28:14704176-14704799 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 131 |
Conread position: | 185-779 |
Cow position: | chr28:5113090-5113693 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 127 |
Conread position: | 185-793 |
Cow position: | chr28:5567344-5566743 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 13 |
Conread position: | 186-720 |
Cow position: | chr28:10646219-10646738 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 51 |
Conread position: | 213-767 |
Cow position: | chr28:24668780-24668238 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 26 |
Conread position: | 232-522 |
Cow position: | chr28:13603682-13603968 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 201 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 138, 68 |
Conread position: | 232-746 |
Cow position: | chr28:5803190-5802667 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 71 |
Conread position: | 232-769 |
Cow position: | chr28:8719794-8720333 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 82 |
Conread position: | 232-793 |
Cow position: | chr28:1813711-1814275 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 78 |
Conread position: | 232-793 |
Cow position: | chr28:32791227-32791785 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 48 |
Conread position: | 235-793 |
Cow position: | chr28:22064246-22064779 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 76 |
Conread position: | 236-506 |
Cow position: | chr28:10873349-10873100 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 199 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 237-793 |
Cow position: | chr28:3019556-3020123 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 59 |
Conread position: | 292-793 |
Cow position: | chr28:2723831-2724335 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 33 |
Conread position: | 319-767 |
Cow position: | chr28:6779272-6779724 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 6 |
Conread position: | 326-793 |
Cow position: | chr28:22232360-22232812 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 292 |
Conread position: | 391-793 |
Cow position: | chr28:25169087-25169482 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 272 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 173, 68 |
Conread position: | 463-772 |
Cow position: | chr28:18146833-18147142 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 202 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 50, 57 |
Conread position: | 488-789 |
Cow position: | chr28:10873077-10872792 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 222 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 27, 79 |
Conread position: | 523-793 |
Cow position: | chr28:33259501-33259229 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 193 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 13, 196 |
Conread position: | 546-789 |
Cow position: | chr28:28473486-28473241 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 169 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.