Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 170-420
Cow position: chr28:6457114-6457357 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 170-497
Cow position: chr28:28440034-28439705 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 143

Conread position: 176-430
Cow position: chr28:10470721-10470464 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 121

Conread position: 176-793
Cow position: chr28:8684519-8685125 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 157

Conread position: 177-426
Cow position: chr28:7028574-7028815 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 209, 65

Conread position: 177-466
Cow position: chr28:27678758-27678471 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 136

Conread position: 177-501
Cow position: chr28:14232717-14233053 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 56, 128

Conread position: 177-513
Cow position: chr28:5799508-5799170 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 34

Conread position: 177-557
Cow position: chr28:10460394-10460776 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 119

Conread position: 177-582
Cow position: chr28:9179828-9179428 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 57

Conread position: 177-611
Cow position: chr28:6231557-6231999 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 115

Conread position: 177-621
Cow position: chr28:29760714-29761166 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 132

Conread position: 177-627
Cow position: chr28:24883770-24884221 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 57

Conread position: 177-652
Cow position: chr28:8380279-8379787 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 123

Conread position: 177-671
Cow position: chr28:10580874-10581376 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-767
Cow position: chr28:21360707-21360095 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 317

Conread position: 177-768
Cow position: chr28:26425039-26425632 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 124

Conread position: 177-769
Cow position: chr28:1506082-1505483 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-769
Cow position: chr28:10072488-10071892 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 132

Conread position: 177-769
Cow position: chr28:22259936-22260538 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-775
Cow position: chr28:3191040-3191644 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-775
Cow position: chr28:5938699-5938091 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 134

Conread position: 177-775
Cow position: chr28:7741657-7741082 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 47

Conread position: 177-775
Cow position: chr28:13461191-13460579 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 571

Conread position: 177-776
Cow position: chr28:17666091-17666696 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-779
Cow position: chr28:12151522-12150908 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 142

Conread position: 177-793
Cow position: chr28:1166664-1167288 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 113

Conread position: 177-793
Cow position: chr28:5750492-5751115 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 123

Conread position: 177-793
Cow position: chr28:18519236-18519856 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 122

Conread position: 178-455
Cow position: chr28:15034909-15035185 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 144, 46

Conread position: 178-500
Cow position: chr28:2987873-2988197 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 139

Conread position: 178-769
Cow position: chr28:29821210-29820618 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 122

Conread position: 179-444
Cow position: chr28:1954567-1954296 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 55, 130

Conread position: 179-774
Cow position: chr28:484382-484982 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 248
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 122

Conread position: 179-793
Cow position: chr28:6538051-6538674 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 131

Conread position: 179-793
Cow position: chr28:14751757-14751133 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 131

Conread position: 181-438
Cow position: chr28:22042076-22042327 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 181-695
Cow position: chr28:33246868-33247394 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 356
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 75

Conread position: 181-752
Cow position: chr28:7811649-7811094 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 384
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 16

Conread position: 181-767
Cow position: chr28:24590068-24589467 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 307

Conread position: 181-768
Cow position: chr28:1386186-1386784 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 77

Conread position: 181-793
Cow position: chr28:14704176-14704799 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 131

Conread position: 185-779
Cow position: chr28:5113090-5113693 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 127

Conread position: 185-793
Cow position: chr28:5567344-5566743 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 13

Conread position: 186-720
Cow position: chr28:10646219-10646738 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 51

Conread position: 213-767
Cow position: chr28:24668780-24668238 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 26

Conread position: 232-522
Cow position: chr28:13603682-13603968 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 138, 68

Conread position: 232-746
Cow position: chr28:5803190-5802667 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 71

Conread position: 232-769
Cow position: chr28:8719794-8720333 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 82

Conread position: 232-793
Cow position: chr28:1813711-1814275 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 78

Conread position: 232-793
Cow position: chr28:32791227-32791785 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 48

Conread position: 235-793
Cow position: chr28:22064246-22064779 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 236-506
Cow position: chr28:10873349-10873100 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 237-793
Cow position: chr28:3019556-3020123 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 59

Conread position: 292-793
Cow position: chr28:2723831-2724335 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 33

Conread position: 319-767
Cow position: chr28:6779272-6779724 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 6

Conread position: 326-793
Cow position: chr28:22232360-22232812 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 292

Conread position: 391-793
Cow position: chr28:25169087-25169482 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 173, 68

Conread position: 463-772
Cow position: chr28:18146833-18147142 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 202
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 57

Conread position: 488-789
Cow position: chr28:10873077-10872792 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 27, 79

Conread position: 523-793
Cow position: chr28:33259501-33259229 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 196

Conread position: 546-789
Cow position: chr28:28473486-28473241 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.