Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 168-775
Cow position:
Alignm length: 624
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 31

Conread position: 174-765
Cow position:
Alignm length: 609
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 126

Conread position: 177-493
Cow position:
Alignm length: 322
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 124

Conread position: 177-514
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 140, 58

Conread position: 177-558
Cow position:
Alignm length: 399
Alignm identity: 265
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 26, 140

Conread position: 177-640
Cow position:
Alignm length: 480
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 29

Conread position: 177-659
Cow position:
Alignm length: 490
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 58

Conread position: 177-659
Cow position:
Alignm length: 496
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 135

Conread position: 177-685
Cow position:
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 122

Conread position: 177-717
Cow position:
Alignm length: 555
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 123

Conread position: 177-739
Cow position:
Alignm length: 582
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-769
Cow position:
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 123

Conread position: 177-769
Cow position:
Alignm length: 615
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 316

Conread position: 177-772
Cow position:
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 40

Conread position: 177-772
Cow position:
Alignm length: 610
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 177-775
Cow position:
Alignm length: 611
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 133

Conread position: 177-779
Cow position:
Alignm length: 619
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 134

Conread position: 177-793
Cow position:
Alignm length: 663
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-793
Cow position:
Alignm length: 631
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 142

Conread position: 177-793
Cow position:
Alignm length: 629
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 130

Conread position: 177-793
Cow position:
Alignm length: 634
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 123

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 135

Conread position: 177-793
Cow position:
Alignm length: 631
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 133

Conread position: 178-764
Cow position:
Alignm length: 600
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 131

Conread position: 178-767
Cow position:
Alignm length: 617
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 21

Conread position: 178-769
Cow position:
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 134

Conread position: 178-769
Cow position:
Alignm length: 599
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 40

Conread position: 178-793
Cow position:
Alignm length: 632
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 112

Conread position: 179-411
Cow position:
Alignm length: 233
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 179-695
Cow position:
Alignm length: 537
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 130

Conread position: 179-720
Cow position:
Alignm length: 547
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 55

Conread position: 179-769
Cow position:
Alignm length: 611
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 136

Conread position: 179-779
Cow position:
Alignm length: 621
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 19

Conread position: 179-793
Cow position:
Alignm length: 633
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 181-463
Cow position:
Alignm length: 291
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 131

Conread position: 181-771
Cow position:
Alignm length: 599
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 133

Conread position: 181-772
Cow position:
Alignm length: 604
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 35

Conread position: 181-779
Cow position:
Alignm length: 611
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 53

Conread position: 181-779
Cow position:
Alignm length: 615
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 131

Conread position: 182-652
Cow position:
Alignm length: 485
Alignm identity: 315
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 54, 42

Conread position: 185-584
Cow position:
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 21

Conread position: 185-769
Cow position:
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 117

Conread position: 185-792
Cow position:
Alignm length: 624
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 124

Conread position: 185-793
Cow position:
Alignm length: 616
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 49

Conread position: 190-465
Cow position:
Alignm length: 276
Alignm identity: 184
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 194-634
Cow position:
Alignm length: 448
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 120

Conread position: 197-793
Cow position:
Alignm length: 605
Alignm identity: 386
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 33

Conread position: 203-751
Cow position:
Alignm length: 559
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 97

Conread position: 232-473
Cow position:
Alignm length: 243
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 138, 67

Conread position: 232-483
Cow position:
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 232-772
Cow position:
Alignm length: 546
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 23

Conread position: 232-775
Cow position:
Alignm length: 557
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 384

Conread position: 232-778
Cow position:
Alignm length: 554
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 159

Conread position: 238-769
Cow position:
Alignm length: 541
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 40

Conread position: 262-572
Cow position:
Alignm length: 313
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 208, 38

Conread position: 262-793
Cow position:
Alignm length: 538
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 41

Conread position: 262-793
Cow position:
Alignm length: 540
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 38

Conread position: 269-760
Cow position:
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 47

Conread position: 292-607
Cow position:
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 12

Conread position: 304-695
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 112

Conread position: 322-793
Cow position:
Alignm length: 479
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 158

Conread position: 348-793
Cow position:
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 129

Conread position: 360-793
Cow position:
Alignm length: 442
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 40

Conread position: 518-787
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 113, 97

Conread position: 544-767
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 196

Show alignments to all cow chromosomes.