Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 172-558
Cow position:
Alignm length: 398
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 44

Conread position: 174-479
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 48, 103

Conread position: 174-501
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 108

Conread position: 174-595
Cow position:
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 138

Conread position: 174-688
Cow position:
Alignm length: 525
Alignm identity: 321
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 143

Conread position: 174-793
Cow position:
Alignm length: 635
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 138

Conread position: 176-422
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 102

Conread position: 176-512
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 24

Conread position: 176-771
Cow position:
Alignm length: 611
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-396
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 137

Conread position: 177-396
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 177-493
Cow position:
Alignm length: 325
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 106

Conread position: 177-501
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 87

Conread position: 177-506
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 177-532
Cow position:
Alignm length: 367
Alignm identity: 251
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 134

Conread position: 177-532
Cow position:
Alignm length: 358
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 293, 59

Conread position: 177-593
Cow position:
Alignm length: 421
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 62

Conread position: 177-643
Cow position:
Alignm length: 480
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 130

Conread position: 177-676
Cow position:
Alignm length: 513
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 121

Conread position: 177-681
Cow position:
Alignm length: 520
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 309

Conread position: 177-721
Cow position:
Alignm length: 560
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 133

Conread position: 177-728
Cow position:
Alignm length: 563
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 57

Conread position: 177-744
Cow position:
Alignm length: 587
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 90

Conread position: 177-761
Cow position:
Alignm length: 602
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 47

Conread position: 177-762
Cow position:
Alignm length: 601
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 126

Conread position: 177-767
Cow position:
Alignm length: 606
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 123

Conread position: 177-767
Cow position:
Alignm length: 609
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-769
Cow position:
Alignm length: 609
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 46

Conread position: 177-769
Cow position:
Alignm length: 605
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 177-772
Cow position:
Alignm length: 606
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 59

Conread position: 177-772
Cow position:
Alignm length: 610
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 57

Conread position: 177-772
Cow position:
Alignm length: 612
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 177-772
Cow position:
Alignm length: 612
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-772
Cow position:
Alignm length: 601
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 57

Conread position: 177-772
Cow position:
Alignm length: 611
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-772
Cow position:
Alignm length: 612
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 7

Conread position: 177-772
Cow position:
Alignm length: 619
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 57

Conread position: 177-775
Cow position:
Alignm length: 618
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 59

Conread position: 177-779
Cow position:
Alignm length: 619
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 142

Conread position: 177-779
Cow position:
Alignm length: 609
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 50

Conread position: 177-779
Cow position:
Alignm length: 619
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 177-779
Cow position:
Alignm length: 629
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 242

Conread position: 177-779
Cow position:
Alignm length: 618
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 145

Conread position: 177-789
Cow position:
Alignm length: 631
Alignm identity: 393
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 91

Conread position: 177-789
Cow position:
Alignm length: 625
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 135

Conread position: 177-793
Cow position:
Alignm length: 642
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 550

Conread position: 177-793
Cow position:
Alignm length: 631
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 177-793
Cow position:
Alignm length: 634
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 135

Conread position: 177-793
Cow position:
Alignm length: 634
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 124

Conread position: 177-793
Cow position:
Alignm length: 623
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 47

Conread position: 177-793
Cow position:
Alignm length: 644
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 126

Conread position: 177-793
Cow position:
Alignm length: 629
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 177-793
Cow position:
Alignm length: 621
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 59

Conread position: 177-793
Cow position:
Alignm length: 634
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 133

Conread position: 177-793
Cow position:
Alignm length: 627
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 107

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 113

Conread position: 177-793
Cow position:
Alignm length: 624
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 58

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-793
Cow position:
Alignm length: 644
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 18

Conread position: 178-388
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 136

Conread position: 178-473
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 143

Conread position: 178-715
Cow position:
Alignm length: 557
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 90

Conread position: 178-767
Cow position:
Alignm length: 602
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 45

Conread position: 178-789
Cow position:
Alignm length: 626
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 101

Conread position: 178-793
Cow position:
Alignm length: 630
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 38

Conread position: 179-465
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 121

Conread position: 179-474
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 264, 55

Conread position: 179-641
Cow position:
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 179-735
Cow position:
Alignm length: 572
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 129

Conread position: 179-772
Cow position:
Alignm length: 604
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 55

Conread position: 179-793
Cow position:
Alignm length: 630
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 126

Conread position: 179-793
Cow position:
Alignm length: 630
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 125

Conread position: 179-793
Cow position:
Alignm length: 635
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 121

Conread position: 181-748
Cow position:
Alignm length: 588
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 42

Conread position: 181-779
Cow position:
Alignm length: 606
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 43

Conread position: 182-602
Cow position:
Alignm length: 434
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 127

Conread position: 182-641
Cow position:
Alignm length: 474
Alignm identity: 312
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 54, 109

Conread position: 182-700
Cow position:
Alignm length: 533
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 120

Conread position: 185-499
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 31, 72

Conread position: 185-592
Cow position:
Alignm length: 415
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 112

Conread position: 185-696
Cow position:
Alignm length: 526
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 90

Conread position: 185-793
Cow position:
Alignm length: 625
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 126

Conread position: 185-793
Cow position:
Alignm length: 621
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 81

Conread position: 185-793
Cow position:
Alignm length: 630
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 127

Conread position: 187-720
Cow position:
Alignm length: 550
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 370

Conread position: 187-767
Cow position:
Alignm length: 593
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 47

Conread position: 187-780
Cow position:
Alignm length: 613
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 124

Conread position: 187-793
Cow position:
Alignm length: 619
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 197-441
Cow position:
Alignm length: 248
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 105

Conread position: 199-662
Cow position:
Alignm length: 471
Alignm identity: 313
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 65, 112

Conread position: 201-468
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 36, 74

Conread position: 205-793
Cow position:
Alignm length: 616
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 525

Conread position: 231-790
Cow position:
Alignm length: 569
Alignm identity: 352
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 27

Conread position: 232-387
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 232-476
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 232-595
Cow position:
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 70

Conread position: 232-647
Cow position:
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 71

Conread position: 232-677
Cow position:
Alignm length: 459
Alignm identity: 305
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 163, 72

Conread position: 232-764
Cow position:
Alignm length: 539
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 71

Conread position: 232-777
Cow position:
Alignm length: 551
Alignm identity: 344
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 298, 70

Conread position: 232-793
Cow position:
Alignm length: 567
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 71

Conread position: 236-766
Cow position:
Alignm length: 538
Alignm identity: 334
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 354, 39

Conread position: 236-767
Cow position:
Alignm length: 540
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 75

Conread position: 237-500
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 54, 0

Conread position: 237-515
Cow position:
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 68

Conread position: 238-767
Cow position:
Alignm length: 537
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 64

Conread position: 238-793
Cow position:
Alignm length: 563
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 64

Conread position: 240-772
Cow position:
Alignm length: 545
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 434

Conread position: 262-563
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 249, 63

Conread position: 262-769
Cow position:
Alignm length: 513
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 31

Conread position: 268-659
Cow position:
Alignm length: 397
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 44

Conread position: 276-563
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 27

Conread position: 276-594
Cow position:
Alignm length: 327
Alignm identity: 211
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 27

Conread position: 304-793
Cow position:
Alignm length: 498
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 21

Conread position: 305-771
Cow position:
Alignm length: 471
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 17

Conread position: 306-728
Cow position:
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 90

Conread position: 314-521
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 195, 0

Conread position: 316-772
Cow position:
Alignm length: 464
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 161

Conread position: 333-787
Cow position:
Alignm length: 460
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 33

Conread position: 334-793
Cow position:
Alignm length: 468
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 74

Conread position: 335-772
Cow position:
Alignm length: 444
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 260

Conread position: 348-767
Cow position:
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 129

Conread position: 348-767
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 129

Conread position: 350-775
Cow position:
Alignm length: 432
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 389

Conread position: 360-780
Cow position:
Alignm length: 426
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 74

Conread position: 451-751
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 68, 258

Conread position: 489-772
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 247

Conread position: 510-793
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 32, 59

Conread position: 522-793
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 199

Conread position: 523-776
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 23

Show alignments to all cow chromosomes.