Cow genome map


           Conread name:
           Thy1-THY010068C08
        

               Conread position:
               170-588
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 141
               

               Conread position:
               171-530
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               172-624
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 118
               

               Conread position:
               174-536
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               174-770
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 79
               

               Conread position:
               176-460
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               60, 144
               

               Conread position:
               176-684
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 125
               

               Conread position:
               176-767
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 138
               

               Conread position:
               177-397
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 136
               

               Conread position:
               177-440
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 137
               

               Conread position:
               177-448
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               177-500
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 94
               

               Conread position:
               177-516
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               177-593
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 86
               

               Conread position:
               177-620
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 134
               

               Conread position:
               177-636
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 124
               

               Conread position:
               177-647
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               177-660
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 146
               

               Conread position:
               177-662
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               177-693
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               177-739
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 22
               

               Conread position:
               177-764
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 129
               

               Conread position:
               177-767
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 134
               

               Conread position:
               177-767
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 59
               

               Conread position:
               177-767
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               177-768
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 14
               

               Conread position:
               177-769
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               177-769
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               177-769
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 125
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 309
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               177-772
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 57
               

               Conread position:
               177-789
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               177-789
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 192
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 123
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 143
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 132
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 135
               

               Conread position:
               177-793
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 316
               

               Conread position:
               178-410
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               178-764
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               386
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               60, 100
               

               Conread position:
               179-502
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 131
               

               Conread position:
               179-510
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               179-750
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 57
               

               Conread position:
               179-767
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               181-501
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               184-793
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 116
               

               Conread position:
               185-662
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               185-767
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               187-779
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 114
               

               Conread position:
               187-793
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               191-523
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 115
               

               Conread position:
               192-583
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 7
               

               Conread position:
               197-478
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               205-707
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 32
               

               Conread position:
               232-641
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               227, 68
               

               Conread position:
               232-684
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               232-775
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               238-495
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               238-779
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 251
               

               Conread position:
               266-766
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               312
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               71, 37
               

               Conread position:
               269-766
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               317
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               198, 54
               

               Conread position:
               280-620
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               99, 31
               

               Conread position:
               306-738
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               308-495
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               314-719
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               316-767
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 387
               

               Conread position:
               318-500
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               152, 159
               

               Conread position:
               373-789
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               401-793
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               163, 56
               

               Conread position:
               428-779
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               435-613
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               462-789
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               561-793
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 6
               
Show alignments to all cow chromosomes.