Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 3-148
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 165-562
Cow position:
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 13

Conread position: 170-772
Cow position:
Alignm length: 619
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 140

Conread position: 170-779
Cow position:
Alignm length: 630
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 142

Conread position: 171-465
Cow position:
Alignm length: 306
Alignm identity: 205
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 63, 7

Conread position: 174-494
Cow position:
Alignm length: 330
Alignm identity: 218
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 61, 139

Conread position: 174-613
Cow position:
Alignm length: 455
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 174-660
Cow position:
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 126

Conread position: 175-793
Cow position:
Alignm length: 631
Alignm identity: 403
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 328, 9

Conread position: 176-601
Cow position:
Alignm length: 447
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 95

Conread position: 177-341
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 177-388
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 59

Conread position: 177-413
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 124

Conread position: 177-413
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 56, 131

Conread position: 177-413
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 91

Conread position: 177-418
Cow position:
Alignm length: 252
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 136

Conread position: 177-444
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 120

Conread position: 177-454
Cow position:
Alignm length: 283
Alignm identity: 184
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 109

Conread position: 177-482
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 58, 134

Conread position: 177-487
Cow position:
Alignm length: 311
Alignm identity: 195
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 177-496
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 44, 123

Conread position: 177-513
Cow position:
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 60

Conread position: 177-536
Cow position:
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 132

Conread position: 177-561
Cow position:
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 47

Conread position: 177-562
Cow position:
Alignm length: 397
Alignm identity: 255
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 59

Conread position: 177-566
Cow position:
Alignm length: 412
Alignm identity: 279
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 24

Conread position: 177-595
Cow position:
Alignm length: 426
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 59

Conread position: 177-602
Cow position:
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 21

Conread position: 177-620
Cow position:
Alignm length: 458
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 47

Conread position: 177-635
Cow position:
Alignm length: 473
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 309

Conread position: 177-659
Cow position:
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 72

Conread position: 177-660
Cow position:
Alignm length: 509
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 177-678
Cow position:
Alignm length: 518
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 59

Conread position: 177-688
Cow position:
Alignm length: 519
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 177-693
Cow position:
Alignm length: 532
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 123

Conread position: 177-693
Cow position:
Alignm length: 531
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 59

Conread position: 177-693
Cow position:
Alignm length: 531
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 123

Conread position: 177-700
Cow position:
Alignm length: 546
Alignm identity: 347
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 302

Conread position: 177-700
Cow position:
Alignm length: 530
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 177-745
Cow position:
Alignm length: 583
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 57

Conread position: 177-763
Cow position:
Alignm length: 592
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 35

Conread position: 177-766
Cow position:
Alignm length: 605
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 91

Conread position: 177-767
Cow position:
Alignm length: 608
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 112

Conread position: 177-767
Cow position:
Alignm length: 606
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 177-767
Cow position:
Alignm length: 611
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 135

Conread position: 177-767
Cow position:
Alignm length: 608
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 177-769
Cow position:
Alignm length: 610
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 46

Conread position: 177-770
Cow position:
Alignm length: 619
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 201

Conread position: 177-772
Cow position:
Alignm length: 603
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 58

Conread position: 177-772
Cow position:
Alignm length: 615
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 311

Conread position: 177-772
Cow position:
Alignm length: 613
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 144

Conread position: 177-776
Cow position:
Alignm length: 614
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 177-779
Cow position:
Alignm length: 615
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 131

Conread position: 177-792
Cow position:
Alignm length: 633
Alignm identity: 393
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 45, 132

Conread position: 177-792
Cow position:
Alignm length: 644
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 124

Conread position: 177-793
Cow position:
Alignm length: 643
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 298

Conread position: 177-793
Cow position:
Alignm length: 631
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 116

Conread position: 177-793
Cow position:
Alignm length: 635
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 136

Conread position: 177-793
Cow position:
Alignm length: 645
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 320

Conread position: 177-793
Cow position:
Alignm length: 646
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 122

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-793
Cow position:
Alignm length: 632
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 84

Conread position: 178-769
Cow position:
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 19

Conread position: 179-525
Cow position:
Alignm length: 358
Alignm identity: 239
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 121

Conread position: 179-575
Cow position:
Alignm length: 416
Alignm identity: 279
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 121

Conread position: 179-688
Cow position:
Alignm length: 531
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 179-745
Cow position:
Alignm length: 590
Alignm identity: 367
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 82

Conread position: 179-779
Cow position:
Alignm length: 618
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 129

Conread position: 179-793
Cow position:
Alignm length: 623
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 55

Conread position: 181-596
Cow position:
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 56

Conread position: 181-688
Cow position:
Alignm length: 522
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 131

Conread position: 181-772
Cow position:
Alignm length: 612
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 181-775
Cow position:
Alignm length: 609
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 374

Conread position: 181-793
Cow position:
Alignm length: 633
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 130

Conread position: 182-793
Cow position:
Alignm length: 624
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 185-779
Cow position:
Alignm length: 605
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 75

Conread position: 185-793
Cow position:
Alignm length: 629
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 127

Conread position: 191-772
Cow position:
Alignm length: 600
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 120

Conread position: 199-789
Cow position:
Alignm length: 601
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 122

Conread position: 231-769
Cow position:
Alignm length: 545
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 174

Conread position: 231-769
Cow position:
Alignm length: 544
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 62

Conread position: 231-793
Cow position:
Alignm length: 571
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 5

Conread position: 232-498
Cow position:
Alignm length: 267
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 232-685
Cow position:
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 67

Conread position: 232-760
Cow position:
Alignm length: 537
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 71

Conread position: 232-768
Cow position:
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 32

Conread position: 232-793
Cow position:
Alignm length: 574
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 70

Conread position: 236-779
Cow position:
Alignm length: 550
Alignm identity: 349
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 10

Conread position: 238-519
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 238-561
Cow position:
Alignm length: 327
Alignm identity: 223
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 232, 53

Conread position: 238-742
Cow position:
Alignm length: 520
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 33

Conread position: 239-465
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 239-602
Cow position:
Alignm length: 369
Alignm identity: 253
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 17, 61

Conread position: 243-793
Cow position:
Alignm length: 564
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 57

Conread position: 245-793
Cow position:
Alignm length: 562
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 59

Conread position: 262-682
Cow position:
Alignm length: 430
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 42

Conread position: 262-769
Cow position:
Alignm length: 517
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 41

Conread position: 262-793
Cow position:
Alignm length: 538
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 38

Conread position: 263-513
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 204, 36

Conread position: 263-688
Cow position:
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 38

Conread position: 272-501
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 81, 21

Conread position: 299-772
Cow position:
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 180

Conread position: 305-595
Cow position:
Alignm length: 293
Alignm identity: 200
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 248, 23

Conread position: 323-793
Cow position:
Alignm length: 479
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 154

Conread position: 344-595
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 219

Conread position: 361-787
Cow position:
Alignm length: 437
Alignm identity: 278
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 158, 175

Conread position: 372-776
Cow position:
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 93

Conread position: 375-766
Cow position:
Alignm length: 400
Alignm identity: 247
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 264

Conread position: 524-769
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 168

Conread position: 631-764
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.