Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 164-562
Cow position:
Alignm length: 412
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 145

Conread position: 170-779
Cow position:
Alignm length: 629
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 29

Conread position: 171-767
Cow position:
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 28

Conread position: 172-553
Cow position:
Alignm length: 396
Alignm identity: 265
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 59, 15

Conread position: 174-793
Cow position:
Alignm length: 637
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 138

Conread position: 176-413
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 133

Conread position: 176-769
Cow position:
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 5

Conread position: 177-367
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 57

Conread position: 177-391
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 198, 128

Conread position: 177-412
Cow position:
Alignm length: 242
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 59

Conread position: 177-413
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 20

Conread position: 177-440
Cow position:
Alignm length: 274
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 122

Conread position: 177-454
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 115

Conread position: 177-474
Cow position:
Alignm length: 310
Alignm identity: 211
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 57, 134

Conread position: 177-478
Cow position:
Alignm length: 311
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 26

Conread position: 177-501
Cow position:
Alignm length: 332
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 27

Conread position: 177-522
Cow position:
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 135

Conread position: 177-523
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 24

Conread position: 177-549
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 54

Conread position: 177-556
Cow position:
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 132

Conread position: 177-562
Cow position:
Alignm length: 398
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 177-576
Cow position:
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-594
Cow position:
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 137

Conread position: 177-594
Cow position:
Alignm length: 442
Alignm identity: 304
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 46

Conread position: 177-641
Cow position:
Alignm length: 481
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 123

Conread position: 177-643
Cow position:
Alignm length: 484
Alignm identity: 309
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 202, 53

Conread position: 177-685
Cow position:
Alignm length: 522
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 132

Conread position: 177-685
Cow position:
Alignm length: 529
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-709
Cow position:
Alignm length: 540
Alignm identity: 344
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 18, 138

Conread position: 177-718
Cow position:
Alignm length: 563
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 127

Conread position: 177-752
Cow position:
Alignm length: 590
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 120

Conread position: 177-759
Cow position:
Alignm length: 605
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 140

Conread position: 177-759
Cow position:
Alignm length: 600
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 87

Conread position: 177-767
Cow position:
Alignm length: 612
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 135

Conread position: 177-768
Cow position:
Alignm length: 605
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 177-769
Cow position:
Alignm length: 614
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-770
Cow position:
Alignm length: 606
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 177-772
Cow position:
Alignm length: 605
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 57

Conread position: 177-772
Cow position:
Alignm length: 615
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 319

Conread position: 177-775
Cow position:
Alignm length: 613
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 125

Conread position: 177-775
Cow position:
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 47

Conread position: 177-775
Cow position:
Alignm length: 613
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 136

Conread position: 177-776
Cow position:
Alignm length: 617
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 135

Conread position: 177-779
Cow position:
Alignm length: 633
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 113

Conread position: 177-779
Cow position:
Alignm length: 620
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 177-787
Cow position:
Alignm length: 625
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 141

Conread position: 177-789
Cow position:
Alignm length: 633
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 126

Conread position: 177-789
Cow position:
Alignm length: 621
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 40

Conread position: 177-792
Cow position:
Alignm length: 629
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 135

Conread position: 177-793
Cow position:
Alignm length: 627
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 127

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-793
Cow position:
Alignm length: 634
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 126

Conread position: 177-793
Cow position:
Alignm length: 635
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 151

Conread position: 178-767
Cow position:
Alignm length: 608
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 89

Conread position: 178-788
Cow position:
Alignm length: 627
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 133

Conread position: 178-793
Cow position:
Alignm length: 638
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 135

Conread position: 179-793
Cow position:
Alignm length: 630
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 9

Conread position: 179-793
Cow position:
Alignm length: 623
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 55

Conread position: 180-663
Cow position:
Alignm length: 498
Alignm identity: 323
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 78, 56

Conread position: 181-472
Cow position:
Alignm length: 292
Alignm identity: 189
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 181-495
Cow position:
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 119

Conread position: 181-635
Cow position:
Alignm length: 469
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 181-741
Cow position:
Alignm length: 572
Alignm identity: 353
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 49, 9

Conread position: 181-771
Cow position:
Alignm length: 606
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 181-771
Cow position:
Alignm length: 611
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 55

Conread position: 181-779
Cow position:
Alignm length: 615
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 181-789
Cow position:
Alignm length: 614
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 57

Conread position: 181-793
Cow position:
Alignm length: 626
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 129

Conread position: 184-674
Cow position:
Alignm length: 510
Alignm identity: 329
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 16

Conread position: 185-793
Cow position:
Alignm length: 632
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 127

Conread position: 187-479
Cow position:
Alignm length: 296
Alignm identity: 195
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 104

Conread position: 190-793
Cow position:
Alignm length: 607
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 11

Conread position: 191-446
Cow position:
Alignm length: 259
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 44

Conread position: 193-769
Cow position:
Alignm length: 592
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 115

Conread position: 199-477
Cow position:
Alignm length: 285
Alignm identity: 187
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 59

Conread position: 199-793
Cow position:
Alignm length: 608
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 107

Conread position: 201-793
Cow position:
Alignm length: 608
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 96

Conread position: 205-792
Cow position:
Alignm length: 595
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 82

Conread position: 212-494
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 93, 20

Conread position: 230-446
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 64

Conread position: 230-767
Cow position:
Alignm length: 547
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 73

Conread position: 231-793
Cow position:
Alignm length: 575
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 483

Conread position: 232-379
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 232-612
Cow position:
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 71

Conread position: 232-651
Cow position:
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 71

Conread position: 232-779
Cow position:
Alignm length: 563
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 31

Conread position: 232-789
Cow position:
Alignm length: 575
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 25

Conread position: 232-793
Cow position:
Alignm length: 573
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 45

Conread position: 232-793
Cow position:
Alignm length: 571
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 59

Conread position: 237-403
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 131

Conread position: 237-413
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 71

Conread position: 237-429
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 63

Conread position: 237-689
Cow position:
Alignm length: 457
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 16

Conread position: 238-643
Cow position:
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 49

Conread position: 241-779
Cow position:
Alignm length: 551
Alignm identity: 334
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 158, 69

Conread position: 262-791
Cow position:
Alignm length: 534
Alignm identity: 343
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 248, 42

Conread position: 263-751
Cow position:
Alignm length: 504
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 41

Conread position: 263-793
Cow position:
Alignm length: 536
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 38

Conread position: 265-767
Cow position:
Alignm length: 528
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 23

Conread position: 274-660
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 29

Conread position: 282-662
Cow position:
Alignm length: 386
Alignm identity: 252
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 139, 28

Conread position: 312-769
Cow position:
Alignm length: 466
Alignm identity: 290
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 133, 17

Conread position: 318-767
Cow position:
Alignm length: 457
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 95

Conread position: 329-793
Cow position:
Alignm length: 474
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 326

Conread position: 498-793
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 37

Conread position: 539-793
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 5

Conread position: 548-770
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 7

Conread position: 568-793
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 61, 170

Show alignments to all cow chromosomes.