Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 170-414
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 157, 67

Conread position: 170-479
Cow position:
Alignm length: 318
Alignm identity: 207
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 130

Conread position: 174-486
Cow position:
Alignm length: 323
Alignm identity: 223
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 61, 96

Conread position: 174-779
Cow position:
Alignm length: 632
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 554

Conread position: 177-357
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 133

Conread position: 177-391
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 59, 123

Conread position: 177-454
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 119

Conread position: 177-468
Cow position:
Alignm length: 301
Alignm identity: 204
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 134

Conread position: 177-468
Cow position:
Alignm length: 303
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 29

Conread position: 177-476
Cow position:
Alignm length: 309
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 58, 125

Conread position: 177-495
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 134

Conread position: 177-496
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 177-500
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 317

Conread position: 177-510
Cow position:
Alignm length: 341
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 132, 57

Conread position: 177-523
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 23

Conread position: 177-562
Cow position:
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 123

Conread position: 177-572
Cow position:
Alignm length: 409
Alignm identity: 259
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 101

Conread position: 177-583
Cow position:
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-586
Cow position:
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 177-594
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 133

Conread position: 177-595
Cow position:
Alignm length: 432
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 47

Conread position: 177-638
Cow position:
Alignm length: 463
Alignm identity: 306
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 367, 60

Conread position: 177-680
Cow position:
Alignm length: 518
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 123

Conread position: 177-718
Cow position:
Alignm length: 551
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 40

Conread position: 177-767
Cow position:
Alignm length: 605
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 171

Conread position: 177-767
Cow position:
Alignm length: 602
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 120

Conread position: 177-769
Cow position:
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-769
Cow position:
Alignm length: 607
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 221

Conread position: 177-769
Cow position:
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 59

Conread position: 177-769
Cow position:
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 59

Conread position: 177-772
Cow position:
Alignm length: 612
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 177-772
Cow position:
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 131

Conread position: 177-772
Cow position:
Alignm length: 604
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 40

Conread position: 177-772
Cow position:
Alignm length: 602
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 49

Conread position: 177-772
Cow position:
Alignm length: 622
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 177-775
Cow position:
Alignm length: 619
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 135

Conread position: 177-775
Cow position:
Alignm length: 616
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-779
Cow position:
Alignm length: 620
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 177-779
Cow position:
Alignm length: 619
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 135

Conread position: 177-779
Cow position:
Alignm length: 609
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 60

Conread position: 177-779
Cow position:
Alignm length: 617
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 139

Conread position: 177-788
Cow position:
Alignm length: 623
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 132

Conread position: 177-788
Cow position:
Alignm length: 629
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-788
Cow position:
Alignm length: 623
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 177-789
Cow position:
Alignm length: 635
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 211

Conread position: 177-793
Cow position:
Alignm length: 631
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-793
Cow position:
Alignm length: 635
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 58

Conread position: 177-793
Cow position:
Alignm length: 630
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 177-793
Cow position:
Alignm length: 630
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 177-793
Cow position:
Alignm length: 632
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 133

Conread position: 178-767
Cow position:
Alignm length: 609
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 133

Conread position: 178-793
Cow position:
Alignm length: 631
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 134

Conread position: 178-793
Cow position:
Alignm length: 650
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 28

Conread position: 179-474
Cow position:
Alignm length: 306
Alignm identity: 205
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 106

Conread position: 179-566
Cow position:
Alignm length: 391
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 54

Conread position: 179-703
Cow position:
Alignm length: 541
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 131

Conread position: 179-752
Cow position:
Alignm length: 586
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 127

Conread position: 179-767
Cow position:
Alignm length: 617
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 320

Conread position: 179-793
Cow position:
Alignm length: 631
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 179-793
Cow position:
Alignm length: 631
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 130

Conread position: 181-588
Cow position:
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 55

Conread position: 181-636
Cow position:
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 131

Conread position: 181-767
Cow position:
Alignm length: 605
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 181-784
Cow position:
Alignm length: 619
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 132

Conread position: 181-789
Cow position:
Alignm length: 640
Alignm identity: 412
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 130

Conread position: 181-793
Cow position:
Alignm length: 628
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 131

Conread position: 181-793
Cow position:
Alignm length: 630
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 24

Conread position: 182-790
Cow position:
Alignm length: 623
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 21

Conread position: 182-792
Cow position:
Alignm length: 616
Alignm identity: 373
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 355, 47

Conread position: 183-495
Cow position:
Alignm length: 317
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 31

Conread position: 183-682
Cow position:
Alignm length: 517
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 128

Conread position: 184-595
Cow position:
Alignm length: 418
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 16

Conread position: 186-772
Cow position:
Alignm length: 602
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 123

Conread position: 187-767
Cow position:
Alignm length: 588
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 47

Conread position: 190-779
Cow position:
Alignm length: 597
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 44

Conread position: 191-530
Cow position:
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 31

Conread position: 192-465
Cow position:
Alignm length: 280
Alignm identity: 184
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 41, 241

Conread position: 192-513
Cow position:
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 107

Conread position: 192-772
Cow position:
Alignm length: 609
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 55

Conread position: 193-766
Cow position:
Alignm length: 579
Alignm identity: 373
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 19

Conread position: 194-501
Cow position:
Alignm length: 311
Alignm identity: 200
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 110

Conread position: 197-595
Cow position:
Alignm length: 404
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 108

Conread position: 204-637
Cow position:
Alignm length: 446
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 63

Conread position: 213-770
Cow position:
Alignm length: 567
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 98

Conread position: 232-480
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 230

Conread position: 232-556
Cow position:
Alignm length: 327
Alignm identity: 216
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 279, 29

Conread position: 232-627
Cow position:
Alignm length: 403
Alignm identity: 270
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 61, 71

Conread position: 232-760
Cow position:
Alignm length: 536
Alignm identity: 329
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 126, 68

Conread position: 232-772
Cow position:
Alignm length: 566
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 357

Conread position: 232-779
Cow position:
Alignm length: 555
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 71

Conread position: 232-783
Cow position:
Alignm length: 563
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 31

Conread position: 232-793
Cow position:
Alignm length: 570
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 71

Conread position: 232-793
Cow position:
Alignm length: 569
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 71

Conread position: 237-458
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 237-793
Cow position:
Alignm length: 564
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 32

Conread position: 238-557
Cow position:
Alignm length: 322
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 281, 72

Conread position: 238-772
Cow position:
Alignm length: 544
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 62

Conread position: 238-793
Cow position:
Alignm length: 563
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 51

Conread position: 241-748
Cow position:
Alignm length: 520
Alignm identity: 324
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 62

Conread position: 262-793
Cow position:
Alignm length: 539
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 24

Conread position: 269-499
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 300-775
Cow position:
Alignm length: 485
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 411

Conread position: 304-793
Cow position:
Alignm length: 497
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 163

Conread position: 326-772
Cow position:
Alignm length: 452
Alignm identity: 287
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 185, 281

Conread position: 359-792
Cow position:
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 350

Conread position: 373-760
Cow position:
Alignm length: 392
Alignm identity: 250
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 187, 130

Conread position: 424-788
Cow position:
Alignm length: 371
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 207

Conread position: 482-769
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 126

Conread position: 526-793
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 213

Conread position: 544-772
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 21

Conread position: 570-793
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 41

Conread position: 586-779
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 118

Conread position: 608-793
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 98

Conread position: 622-789
Cow position:
Alignm length: 169
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 10

Conread position: 631-793
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 74

Show alignments to all cow chromosomes.