Cow genome map
Conread name: | Thy1-THY010068C08 |
Conread position: | 1-151 |
Cow position: | chr9:31061130-31061279 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 112 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 75, 102 |
Conread position: | 164-501 |
Cow position: | chr9:3804633-3804282 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 242 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 32, 148 |
Conread position: | 171-677 |
Cow position: | chr9:35315806-35316295 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 142 |
Conread position: | 174-718 |
Cow position: | chr9:17304907-17305460 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 9 |
Conread position: | 174-767 |
Cow position: | chr9:17063313-17063920 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 11 |
Conread position: | 174-793 |
Cow position: | chr9:18508752-18509357 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 62 |
Conread position: | 174-793 |
Cow position: | chr9:51181107-51181743 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 453 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 121 |
Conread position: | 176-791 |
Cow position: | chr9:9706611-9705993 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 5 |
Conread position: | 176-793 |
Cow position: | chr9:9014152-9013543 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 46 |
Conread position: | 176-793 |
Cow position: | chr9:44819216-44818621 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 135 |
Conread position: | 176-793 |
Cow position: | chr9:52292468-52291867 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 23 |
Conread position: | 177-387 |
Cow position: | chr9:1995323-1995540 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 153 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 54, 125 |
Conread position: | 177-426 |
Cow position: | chr9:30488661-30488408 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 178 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 50, 91 |
Conread position: | 177-466 |
Cow position: | chr9:3963063-3963353 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 207 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 52, 102 |
Conread position: | 177-478 |
Cow position: | chr9:4283034-4282738 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 213 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 58, 128 |
Conread position: | 177-485 |
Cow position: | chr9:59428077-59427791 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 213 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 177-498 |
Cow position: | chr9:21410364-21410034 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 148 |
Conread position: | 177-606 |
Cow position: | chr9:650960-651384 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 63 |
Conread position: | 177-620 |
Cow position: | chr9:27935444-27934995 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 57 |
Conread position: | 177-625 |
Cow position: | chr9:4649538-4649983 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 50 |
Conread position: | 177-641 |
Cow position: | chr9:28655415-28654950 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 319 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 45, 118 |
Conread position: | 177-642 |
Cow position: | chr9:22432340-22431873 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 107 |
Conread position: | 177-680 |
Cow position: | chr9:1981340-1980828 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 88 |
Conread position: | 177-768 |
Cow position: | chr9:60276951-60277549 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 132 |
Conread position: | 177-769 |
Cow position: | chr9:28022873-28022270 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 96 |
Conread position: | 177-769 |
Cow position: | chr9:37970140-37970730 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 337, 46 |
Conread position: | 177-771 |
Cow position: | chr9:29329703-29329124 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 85 |
Conread position: | 177-771 |
Cow position: | chr9:54925615-54925016 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 59 |
Conread position: | 177-772 |
Cow position: | chr9:45874405-45873808 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 134 |
Conread position: | 177-772 |
Cow position: | chr9:50729071-50729654 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 110 |
Conread position: | 177-773 |
Cow position: | chr9:16176836-16176233 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 84 |
Conread position: | 177-775 |
Cow position: | chr9:3764066-3763464 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 177-775 |
Cow position: | chr9:27035750-27035142 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 135 |
Conread position: | 177-775 |
Cow position: | chr9:42310745-42310147 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 134 |
Conread position: | 177-779 |
Cow position: | chr9:5005036-5004437 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 132 |
Conread position: | 177-779 |
Cow position: | chr9:6250366-6249755 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 135 |
Conread position: | 177-779 |
Cow position: | chr9:29027144-29027746 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 134 |
Conread position: | 177-779 |
Cow position: | chr9:30673442-30672822 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 160 |
Conread position: | 177-792 |
Cow position: | chr9:10937662-10937021 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 135 |
Conread position: | 177-793 |
Cow position: | chr9:130097-130747 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 417 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 44, 362 |
Conread position: | 177-793 |
Cow position: | chr9:221445-222087 (view UCSC Genome Browser custom track) |
Alignm length: | 646 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 221 |
Conread position: | 177-793 |
Cow position: | chr9:3005172-3005803 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 21 |
Conread position: | 177-793 |
Cow position: | chr9:3543917-3543286 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 59 |
Conread position: | 177-793 |
Cow position: | chr9:10322870-10322247 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 131 |
Conread position: | 177-793 |
Cow position: | chr9:22654643-22654014 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 360 |
Conread position: | 177-793 |
Cow position: | chr9:28679039-28678414 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 134 |
Conread position: | 177-793 |
Cow position: | chr9:31808644-31808012 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 123 |
Conread position: | 177-793 |
Cow position: | chr9:32970014-32969392 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 134 |
Conread position: | 177-793 |
Cow position: | chr9:47003253-47002637 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 337, 126 |
Conread position: | 177-793 |
Cow position: | chr9:59481729-59482359 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 134 |
Conread position: | 178-562 |
Cow position: | chr9:33243263-33243663 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 277 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 48, 127 |
Conread position: | 178-767 |
Cow position: | chr9:4942746-4943345 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 128 |
Conread position: | 178-793 |
Cow position: | chr9:5515486-5514867 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 132 |
Conread position: | 178-793 |
Cow position: | chr9:25188166-25187547 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 136 |
Conread position: | 178-793 |
Cow position: | chr9:25632952-25633566 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 18 |
Conread position: | 178-793 |
Cow position: | chr9:29627691-29628305 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 53 |
Conread position: | 179-411 |
Cow position: | chr9:5141777-5141546 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 167 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 57, 93 |
Conread position: | 179-760 |
Cow position: | chr9:3148211-3148796 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 25 |
Conread position: | 179-779 |
Cow position: | chr9:1250935-1251544 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 45 |
Conread position: | 181-688 |
Cow position: | chr9:12063052-12062549 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 337 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 54, 22 |
Conread position: | 181-769 |
Cow position: | chr9:37161749-37162348 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 132 |
Conread position: | 182-772 |
Cow position: | chr9:1075154-1075735 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 17 |
Conread position: | 182-772 |
Cow position: | chr9:2866907-2867513 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 395 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 19, 165 |
Conread position: | 185-641 |
Cow position: | chr9:25034651-25035118 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 115 |
Conread position: | 189-793 |
Cow position: | chr9:51211729-51211123 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 15 |
Conread position: | 200-467 |
Cow position: | chr9:30435616-30435341 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 188 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 33, 102 |
Conread position: | 200-694 |
Cow position: | chr9:26102060-26102543 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 12 |
Conread position: | 209-772 |
Cow position: | chr9:34722927-34722367 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 23 |
Conread position: | 211-764 |
Cow position: | chr9:43664814-43664283 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 24 |
Conread position: | 231-780 |
Cow position: | chr9:2476760-2476223 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 49 |
Conread position: | 232-479 |
Cow position: | chr9:12390164-12390408 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 163 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 18, 46 |
Conread position: | 232-556 |
Cow position: | chr9:39731056-39731373 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 46 |
Conread position: | 232-683 |
Cow position: | chr9:13474783-13475245 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 37 |
Conread position: | 232-751 |
Cow position: | chr9:45151178-45150668 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 337 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 189, 56 |
Conread position: | 232-779 |
Cow position: | chr9:3167930-3167402 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 351 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 147, 64 |
Conread position: | 232-793 |
Cow position: | chr9:2172057-2171504 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 363 |
Conread position: | 237-503 |
Cow position: | chr9:32296248-32296505 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 185 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 109, 67 |
Conread position: | 237-511 |
Cow position: | chr9:8165882-8166154 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 187 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 237-765 |
Cow position: | chr9:2053755-2053225 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 16 |
Conread position: | 238-563 |
Cow position: | chr9:16629671-16629991 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 213 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 276, 62 |
Conread position: | 238-646 |
Cow position: | chr9:25903506-25903102 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 277 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 224, 62 |
Conread position: | 238-745 |
Cow position: | chr9:7061083-7061588 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 274, 62 |
Conread position: | 268-507 |
Cow position: | chr9:9825119-9824883 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 165 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 202, 32 |
Conread position: | 272-501 |
Cow position: | chr9:39942390-39942172 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 163 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 123, 37 |
Conread position: | 296-767 |
Cow position: | chr9:20308210-20308682 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 16 |
Conread position: | 335-779 |
Cow position: | chr9:42569807-42569358 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 212 |
Conread position: | 349-769 |
Cow position: | chr9:59173258-59173681 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 130 |
Conread position: | 385-789 |
Cow position: | chr9:23816839-23816442 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 264 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 96, 14 |
Conread position: | 428-767 |
Cow position: | chr9:3998822-3998479 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 232 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 87, 21 |
Conread position: | 461-789 |
Cow position: | chr9:53701952-53702283 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 233 |
Conread position: | 582-793 |
Cow position: | chr9:9329442-9329654 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 149 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 57, 179 |
Show alignments to all cow chromosomes.