Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 1-172
Cow position: chrX:731235-731064 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 77, 117

Conread position: 170-620
Cow position: chrX:23132948-23132499 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 141

Conread position: 170-767
Cow position: chrX:22618329-22618926 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 64

Conread position: 172-793
Cow position: chrX:13075726-13076350 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 5

Conread position: 174-467
Cow position: chrX:15308958-15309250 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 25

Conread position: 176-779
Cow position: chrX:30365809-30366406 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 138

Conread position: 177-367
Cow position: chrX:35940288-35940472 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 177-409
Cow position: chrX:8574517-8574742 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 61

Conread position: 177-411
Cow position: chrX:3467673-3467902 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 177-411
Cow position: chrX:15623527-15623764 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 132

Conread position: 177-413
Cow position: chrX:30058023-30057784 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 120

Conread position: 177-458
Cow position: chrX:674229-674518 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 57, 83

Conread position: 177-478
Cow position: chrX:26426609-26426899 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 177-513
Cow position: chrX:41102493-41102834 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 56, 134

Conread position: 177-536
Cow position: chrX:2011728-2012092 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 247
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 18

Conread position: 177-566
Cow position: chrX:21731787-21732183 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 255
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 135

Conread position: 177-582
Cow position: chrX:2577399-2576981 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 134

Conread position: 177-586
Cow position: chrX:28560919-28561333 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 130

Conread position: 177-602
Cow position: chrX:2103158-2102725 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 177-625
Cow position: chrX:13182153-13182602 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 130

Conread position: 177-642
Cow position: chrX:44388736-44388270 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 125

Conread position: 177-647
Cow position: chrX:27316249-27315769 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 123

Conread position: 177-664
Cow position: chrX:17666811-17667302 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 135

Conread position: 177-675
Cow position: chrX:12314778-12315291 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 139

Conread position: 177-683
Cow position: chrX:38148569-38148051 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 24

Conread position: 177-685
Cow position: chrX:7031436-7030915 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-742
Cow position: chrX:21269082-21269656 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-762
Cow position: chrX:28554584-28553996 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 126

Conread position: 177-764
Cow position: chrX:30182966-30183547 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 132

Conread position: 177-767
Cow position: chrX:6872097-6872700 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-767
Cow position: chrX:8480624-8480023 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 177-767
Cow position: chrX:9009312-9008711 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 130

Conread position: 177-767
Cow position: chrX:16276620-16276022 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-767
Cow position: chrX:16362149-16362751 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 310

Conread position: 177-767
Cow position: chrX:22816833-22816222 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 548

Conread position: 177-767
Cow position: chrX:29910456-29911052 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 114

Conread position: 177-769
Cow position: chrX:21830503-21829902 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 122

Conread position: 177-771
Cow position: chrX:11148363-11148964 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 177-771
Cow position: chrX:24134286-24134886 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 58

Conread position: 177-771
Cow position: chrX:26766227-26766828 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 46

Conread position: 177-772
Cow position: chrX:2605029-2604416 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 135

Conread position: 177-772
Cow position: chrX:3420238-3420822 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 57

Conread position: 177-772
Cow position: chrX:8589135-8588546 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 133

Conread position: 177-772
Cow position: chrX:29286407-29285809 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 159

Conread position: 177-772
Cow position: chrX:32066194-32066794 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 131

Conread position: 177-775
Cow position: chrX:16700292-16699672 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 342

Conread position: 177-775
Cow position: chrX:23277997-23277388 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 177-777
Cow position: chrX:4752653-4753240 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 397
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 58, 125

Conread position: 177-779
Cow position: chrX:6013977-6014552 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 59

Conread position: 177-779
Cow position: chrX:22489117-22488509 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 136

Conread position: 177-779
Cow position: chrX:26528948-26528339 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 131

Conread position: 177-779
Cow position: chrX:26757641-26758242 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-779
Cow position: chrX:29852595-29853204 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 102

Conread position: 177-789
Cow position: chrX:13416459-13417073 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 138

Conread position: 177-789
Cow position: chrX:24195438-24196031 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 388
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 102

Conread position: 177-792
Cow position: chrX:321439-320818 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 134

Conread position: 177-792
Cow position: chrX:971753-971123 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 177-792
Cow position: chrX:34245816-34246433 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 384
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 131

Conread position: 177-793
Cow position: chrX:1834791-1834165 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-793
Cow position: chrX:13412160-13412785 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 122

Conread position: 177-793
Cow position: chrX:15126253-15126889 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 126

Conread position: 177-793
Cow position: chrX:16015447-16016077 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 391

Conread position: 177-793
Cow position: chrX:18952709-18953334 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 22

Conread position: 177-793
Cow position: chrX:23040150-23040775 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 177-793
Cow position: chrX:30070696-30070096 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 389
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 342, 40

Conread position: 177-793
Cow position: chrX:31186243-31186877 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 147

Conread position: 177-793
Cow position: chrX:39562960-39563586 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 105

Conread position: 177-793
Cow position: chrX:41888022-41888639 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 59

Conread position: 178-511
Cow position: chrX:16780264-16779941 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 145, 45

Conread position: 178-772
Cow position: chrX:29885962-29885361 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 387
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 50, 45

Conread position: 178-772
Cow position: chrX:35530825-35530230 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 56

Conread position: 178-779
Cow position: chrX:30231125-30231737 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 121

Conread position: 178-792
Cow position: chrX:12668778-12669392 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 134

Conread position: 179-450
Cow position: chrX:13397248-13397524 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 45

Conread position: 179-462
Cow position: chrX:10745182-10745468 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 105

Conread position: 179-567
Cow position: chrX:14460495-14460100 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 270
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 131

Conread position: 179-588
Cow position: chrX:979567-979149 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 179-596
Cow position: chrX:12653552-12653980 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 155

Conread position: 179-601
Cow position: chrX:3374937-3375364 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 81

Conread position: 179-751
Cow position: chrX:23071659-23071091 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 361
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 39

Conread position: 179-767
Cow position: chrX:983635-983035 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 131

Conread position: 179-767
Cow position: chrX:2561888-2562484 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 179-767
Cow position: chrX:12702732-12703331 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 117

Conread position: 179-767
Cow position: chrX:15979987-15980583 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 121

Conread position: 179-767
Cow position: chrX:27425354-27425947 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 131

Conread position: 179-767
Cow position: chrX:29172791-29173388 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 130

Conread position: 179-767
Cow position: chrX:37813123-37812534 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 45

Conread position: 179-772
Cow position: chrX:3084166-3084754 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 52

Conread position: 179-772
Cow position: chrX:5394034-5394633 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 179-789
Cow position: chrX:5335514-5336135 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 179-789
Cow position: chrX:28585951-28585331 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 132

Conread position: 179-793
Cow position: chrX:9126332-9125710 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 179-793
Cow position: chrX:12287432-12288056 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 123

Conread position: 179-793
Cow position: chrX:17477453-17478078 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 179-793
Cow position: chrX:34346195-34345585 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 105

Conread position: 179-793
Cow position: chrX:37849960-37849360 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 45

Conread position: 181-763
Cow position: chrX:1547948-1547357 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 183-793
Cow position: chrX:7752867-7752246 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 185-471
Cow position: chrX:11086323-11086615 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 191
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 133

Conread position: 185-693
Cow position: chrX:16811480-16811996 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 185-767
Cow position: chrX:15178471-15179052 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 49

Conread position: 185-793
Cow position: chrX:2481666-2482282 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 79

Conread position: 185-793
Cow position: chrX:12354200-12353587 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 118

Conread position: 186-767
Cow position: chrX:29778547-29779121 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 385
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 69, 32

Conread position: 186-793
Cow position: chrX:12343900-12343301 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 125

Conread position: 187-767
Cow position: chrX:6281791-6282380 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 255

Conread position: 187-793
Cow position: chrX:4411611-4411020 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 409
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 84

Conread position: 191-626
Cow position: chrX:18553389-18552946 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 128

Conread position: 191-772
Cow position: chrX:4797284-4796687 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 122

Conread position: 201-767
Cow position: chrX:5305098-5304530 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 105

Conread position: 201-772
Cow position: chrX:20315114-20315694 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 33

Conread position: 201-793
Cow position: chrX:13096332-13096924 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 31

Conread position: 206-772
Cow position: chrX:21589908-21589337 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 208-793
Cow position: chrX:23213415-23214006 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 28

Conread position: 211-793
Cow position: chrX:31494348-31493767 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 19

Conread position: 231-425
Cow position: chrX:10416544-10416738 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 38

Conread position: 232-378
Cow position: chrX:505419-505563 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 78

Conread position: 232-493
Cow position: chrX:29793122-29793382 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 24, 39

Conread position: 232-568
Cow position: chrX:26999496-26999169 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 73

Conread position: 232-744
Cow position: chrX:13053917-13053408 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 30

Conread position: 232-769
Cow position: chrX:28650643-28651173 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 70

Conread position: 232-779
Cow position: chrX:21059693-21059146 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 71

Conread position: 232-779
Cow position: chrX:35386270-35386814 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 375
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 37, 78

Conread position: 232-793
Cow position: chrX:29097105-29096555 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 237-452
Cow position: chrX:34219215-34219004 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 238-749
Cow position: chrX:30170927-30171441 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 74

Conread position: 240-587
Cow position: chrX:33707336-33706989 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 242, 71

Conread position: 263-475
Cow position: chrX:24377877-24377662 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 42

Conread position: 263-746
Cow position: chrX:25562717-25563199 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 311
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 41

Conread position: 274-792
Cow position: chrX:17727464-17726945 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 325
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 166, 27

Conread position: 276-790
Cow position: chrX:22512864-22513365 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 35

Conread position: 276-792
Cow position: chrX:24523612-24523122 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 334
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 24

Conread position: 282-792
Cow position: chrX:23957921-23957425 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 307
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 233, 11

Conread position: 292-779
Cow position: chrX:15599817-15599327 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 30

Conread position: 297-775
Cow position: chrX:20720844-20720355 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 418

Conread position: 303-772
Cow position: chrX:22524760-22525236 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 441

Conread position: 305-767
Cow position: chrX:26399340-26399808 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 172

Conread position: 317-642
Cow position: chrX:17052034-17051706 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 8

Conread position: 417-793
Cow position: chrX:12654034-12654415 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 62

Conread position: 432-747
Cow position: chrX:21490897-21490576 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 157

Conread position: 449-787
Cow position: chrX:24615743-24616079 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 223
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 77

Conread position: 485-775
Cow position: chrX:21223586-21223290 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 30, 224

Conread position: 518-768
Cow position: chrX:27495544-27495296 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 123

Conread position: 520-764
Cow position: chrX:24377656-24377414 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 40

Conread position: 520-779
Cow position: chrX:30057756-30057492 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 218

Show alignments to all cow chromosomes.