Cow genome map

Conread name: Thy1-THY010068C08

Conread position: 1-172
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 77, 117

Conread position: 170-620
Cow position:
Alignm length: 464
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 141

Conread position: 170-767
Cow position:
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 64

Conread position: 172-793
Cow position:
Alignm length: 633
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 5

Conread position: 174-467
Cow position:
Alignm length: 303
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 25

Conread position: 176-779
Cow position:
Alignm length: 620
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 138

Conread position: 177-367
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 177-409
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 61

Conread position: 177-411
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 177-411
Cow position:
Alignm length: 244
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 132

Conread position: 177-413
Cow position:
Alignm length: 243
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 120

Conread position: 177-458
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 57, 83

Conread position: 177-478
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 177-513
Cow position:
Alignm length: 345
Alignm identity: 237
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 56, 134

Conread position: 177-536
Cow position:
Alignm length: 373
Alignm identity: 247
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 18

Conread position: 177-566
Cow position:
Alignm length: 403
Alignm identity: 255
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 135

Conread position: 177-582
Cow position:
Alignm length: 422
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 134

Conread position: 177-586
Cow position:
Alignm length: 420
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 130

Conread position: 177-602
Cow position:
Alignm length: 438
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 177-625
Cow position:
Alignm length: 464
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 130

Conread position: 177-642
Cow position:
Alignm length: 479
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 125

Conread position: 177-647
Cow position:
Alignm length: 485
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 123

Conread position: 177-664
Cow position:
Alignm length: 497
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 135

Conread position: 177-675
Cow position:
Alignm length: 517
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 139

Conread position: 177-683
Cow position:
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 24

Conread position: 177-685
Cow position:
Alignm length: 527
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-742
Cow position:
Alignm length: 589
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-762
Cow position:
Alignm length: 602
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 126

Conread position: 177-764
Cow position:
Alignm length: 605
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 132

Conread position: 177-767
Cow position:
Alignm length: 607
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 177-767
Cow position:
Alignm length: 607
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 177-767
Cow position:
Alignm length: 609
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 130

Conread position: 177-767
Cow position:
Alignm length: 606
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-767
Cow position:
Alignm length: 606
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 310

Conread position: 177-767
Cow position:
Alignm length: 614
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 548

Conread position: 177-767
Cow position:
Alignm length: 604
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 114

Conread position: 177-769
Cow position:
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 122

Conread position: 177-771
Cow position:
Alignm length: 612
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 177-771
Cow position:
Alignm length: 612
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 58

Conread position: 177-771
Cow position:
Alignm length: 617
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 46

Conread position: 177-772
Cow position:
Alignm length: 619
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 135

Conread position: 177-772
Cow position:
Alignm length: 609
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 57

Conread position: 177-772
Cow position:
Alignm length: 610
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 133

Conread position: 177-772
Cow position:
Alignm length: 612
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 159

Conread position: 177-772
Cow position:
Alignm length: 608
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 131

Conread position: 177-775
Cow position:
Alignm length: 626
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 342

Conread position: 177-775
Cow position:
Alignm length: 616
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 177-777
Cow position:
Alignm length: 619
Alignm identity: 397
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 58, 125

Conread position: 177-779
Cow position:
Alignm length: 608
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 59

Conread position: 177-779
Cow position:
Alignm length: 620
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 136

Conread position: 177-779
Cow position:
Alignm length: 618
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 131

Conread position: 177-779
Cow position:
Alignm length: 618
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 177-779
Cow position:
Alignm length: 615
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 102

Conread position: 177-789
Cow position:
Alignm length: 628
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 138

Conread position: 177-789
Cow position:
Alignm length: 620
Alignm identity: 388
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 102

Conread position: 177-792
Cow position:
Alignm length: 634
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 134

Conread position: 177-792
Cow position:
Alignm length: 636
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 177-792
Cow position:
Alignm length: 632
Alignm identity: 384
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 131

Conread position: 177-793
Cow position:
Alignm length: 635
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 123

Conread position: 177-793
Cow position:
Alignm length: 632
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 122

Conread position: 177-793
Cow position:
Alignm length: 641
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 126

Conread position: 177-793
Cow position:
Alignm length: 644
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 391

Conread position: 177-793
Cow position:
Alignm length: 632
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 22

Conread position: 177-793
Cow position:
Alignm length: 633
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 177-793
Cow position:
Alignm length: 623
Alignm identity: 389
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 342, 40

Conread position: 177-793
Cow position:
Alignm length: 640
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 147

Conread position: 177-793
Cow position:
Alignm length: 635
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 105

Conread position: 177-793
Cow position:
Alignm length: 631
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 59

Conread position: 178-511
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 145, 45

Conread position: 178-772
Cow position:
Alignm length: 613
Alignm identity: 387
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 50, 45

Conread position: 178-772
Cow position:
Alignm length: 603
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 56

Conread position: 178-779
Cow position:
Alignm length: 619
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 121

Conread position: 178-792
Cow position:
Alignm length: 630
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 134

Conread position: 179-450
Cow position:
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 45

Conread position: 179-462
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 105

Conread position: 179-567
Cow position:
Alignm length: 401
Alignm identity: 270
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 131

Conread position: 179-588
Cow position:
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 130

Conread position: 179-596
Cow position:
Alignm length: 431
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 155

Conread position: 179-601
Cow position:
Alignm length: 436
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 81

Conread position: 179-751
Cow position:
Alignm length: 583
Alignm identity: 361
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 39

Conread position: 179-767
Cow position:
Alignm length: 606
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 131

Conread position: 179-767
Cow position:
Alignm length: 607
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 179-767
Cow position:
Alignm length: 605
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 117

Conread position: 179-767
Cow position:
Alignm length: 606
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 121

Conread position: 179-767
Cow position:
Alignm length: 603
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 131

Conread position: 179-767
Cow position:
Alignm length: 605
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 130

Conread position: 179-767
Cow position:
Alignm length: 599
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 45

Conread position: 179-772
Cow position:
Alignm length: 603
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 52

Conread position: 179-772
Cow position:
Alignm length: 612
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 179-789
Cow position:
Alignm length: 627
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 179-789
Cow position:
Alignm length: 627
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 132

Conread position: 179-793
Cow position:
Alignm length: 631
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 179-793
Cow position:
Alignm length: 631
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 123

Conread position: 179-793
Cow position:
Alignm length: 631
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 179-793
Cow position:
Alignm length: 628
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 105

Conread position: 179-793
Cow position:
Alignm length: 623
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 45

Conread position: 181-763
Cow position:
Alignm length: 601
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 183-793
Cow position:
Alignm length: 633
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 185-471
Cow position:
Alignm length: 296
Alignm identity: 191
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 133

Conread position: 185-693
Cow position:
Alignm length: 523
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 185-767
Cow position:
Alignm length: 590
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 49

Conread position: 185-793
Cow position:
Alignm length: 626
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 79

Conread position: 185-793
Cow position:
Alignm length: 625
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 118

Conread position: 186-767
Cow position:
Alignm length: 599
Alignm identity: 385
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 69, 32

Conread position: 186-793
Cow position:
Alignm length: 622
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 125

Conread position: 187-767
Cow position:
Alignm length: 600
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 255

Conread position: 187-793
Cow position:
Alignm length: 625
Alignm identity: 409
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 84

Conread position: 191-626
Cow position:
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 128

Conread position: 191-772
Cow position:
Alignm length: 607
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 122

Conread position: 201-767
Cow position:
Alignm length: 575
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 105

Conread position: 201-772
Cow position:
Alignm length: 586
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 33

Conread position: 201-793
Cow position:
Alignm length: 600
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 31

Conread position: 206-772
Cow position:
Alignm length: 576
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 208-793
Cow position:
Alignm length: 601
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 28

Conread position: 211-793
Cow position:
Alignm length: 592
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 19

Conread position: 231-425
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 38

Conread position: 232-378
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 78

Conread position: 232-493
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 24, 39

Conread position: 232-568
Cow position:
Alignm length: 340
Alignm identity: 227
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 73

Conread position: 232-744
Cow position:
Alignm length: 520
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 30

Conread position: 232-769
Cow position:
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 70

Conread position: 232-779
Cow position:
Alignm length: 554
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 71

Conread position: 232-779
Cow position:
Alignm length: 574
Alignm identity: 375
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 37, 78

Conread position: 232-793
Cow position:
Alignm length: 569
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 237-452
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 238-749
Cow position:
Alignm length: 521
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 74

Conread position: 240-587
Cow position:
Alignm length: 355
Alignm identity: 241
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 242, 71

Conread position: 263-475
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 42

Conread position: 263-746
Cow position:
Alignm length: 498
Alignm identity: 311
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 41

Conread position: 274-792
Cow position:
Alignm length: 529
Alignm identity: 325
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 166, 27

Conread position: 276-790
Cow position:
Alignm length: 522
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 35

Conread position: 276-792
Cow position:
Alignm length: 523
Alignm identity: 334
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 24

Conread position: 282-792
Cow position:
Alignm length: 514
Alignm identity: 307
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 233, 11

Conread position: 292-779
Cow position:
Alignm length: 495
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 30

Conread position: 297-775
Cow position:
Alignm length: 492
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 418

Conread position: 303-772
Cow position:
Alignm length: 478
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 441

Conread position: 305-767
Cow position:
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 172

Conread position: 317-642
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 8

Conread position: 417-793
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 62

Conread position: 432-747
Cow position:
Alignm length: 324
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 157

Conread position: 449-787
Cow position:
Alignm length: 347
Alignm identity: 223
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 77

Conread position: 485-775
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 30, 224

Conread position: 518-768
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 123

Conread position: 520-764
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 40

Conread position: 520-779
Cow position:
Alignm length: 266
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 218

Show alignments to all cow chromosomes.