Cow genome map


           Conread name:
           Thy1-THY010074B02
        

               Conread position:
               145-396
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               147-405
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               147-422
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               149-401
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 110
               

               Conread position:
               155-396
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 104
               

               Conread position:
               156-396
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 106
               

               Conread position:
               156-396
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 103
               

               Conread position:
               157-429
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               157-641
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 101
               

               Conread position:
               160-396
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               161-505
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 97
               

               Conread position:
               162-396
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               162-396
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 96
               

               Conread position:
               162-401
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 96
               

               Conread position:
               163-389
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 96
               

               Conread position:
               163-394
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               155, 19
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               85, 9
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 75
               

               Conread position:
               163-398
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 95
               

               Conread position:
               163-641
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 95
               

               Conread position:
               164-269
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               164-331
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               39, 76
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 92
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               20, 88
               

               Conread position:
               164-398
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 73
               

               Conread position:
               164-401
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-422
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-641
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               165-308
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               165-318
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 98
               

               Conread position:
               165-337
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               151, 37
               

               Conread position:
               165-393
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               148, 60
               

               Conread position:
               165-395
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 96
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               96, 72
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 73
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 83
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               153, 16
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               150, 84
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 97
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               123, 76
               

               Conread position:
               165-401
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               151, 93
               

               Conread position:
               165-401
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-401
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               155, 58
               

               Conread position:
               165-408
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               46, 111
               

               Conread position:
               165-427
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 96
               

               Conread position:
               165-503
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 93
               

               Conread position:
               165-650
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 23
               

               Conread position:
               165-655
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               166-331
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               152, 92
               

               Conread position:
               167-359
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               157
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               151, 91
               

               Conread position:
               167-393
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               167-395
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 91
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 91
               

               Conread position:
               167-650
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 46
               

               Conread position:
               176-500
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               83, 75
               

               Conread position:
               177-396
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               179-398
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 66
               

               Conread position:
               184-396
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               106, 74
               

               Conread position:
               189-399
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               129, 69
               

               Conread position:
               190-500
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 68
               

               Conread position:
               192-396
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               131, 70
               

               Conread position:
               203-363
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               115, 39
               

               Conread position:
               210-422
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               108, 51
               

               Conread position:
               223-447
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               95, 38
               

               Conread position:
               230-656
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               251-655
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               259-396
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               259-396
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               261-398
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               432-597
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.