Cow genome map
| Conread name: | Thy1-THY010074B02 |
| Conread position: | 152-396 |
| Cow position: | chr10:9563122-9563349 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 157-396 |
| Cow position: | chr10:32746536-32746772 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 92 |
| Conread position: | 157-396 |
| Cow position: | chr10:33715844-33716069 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 5, 85 |
| Conread position: | 160-396 |
| Cow position: | chr10:53484702-53484935 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 158, 21 |
| Conread position: | 161-396 |
| Cow position: | chr10:15394949-15395183 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 48 |
| Conread position: | 163-312 |
| Cow position: | chr10:35130362-35130220 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 163-396 |
| Cow position: | chr10:13339441-13339671 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 86 |
| Conread position: | 163-396 |
| Cow position: | chr10:14425320-14425552 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 95 |
| Conread position: | 163-396 |
| Cow position: | chr10:50577256-50577489 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 94 |
| Conread position: | 163-656 |
| Cow position: | chr10:14643487-14643958 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 44 |
| Conread position: | 163-667 |
| Cow position: | chr10:44316487-44317009 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 49 |
| Conread position: | 164-288 |
| Cow position: | chr10:50725842-50725964 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 164-318 |
| Cow position: | chr10:15438629-15438781 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 164-386 |
| Cow position: | chr10:30427791-30428004 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 156, 66 |
| Conread position: | 164-394 |
| Cow position: | chr10:53976528-53976756 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-396 |
| Cow position: | chr10:27773763-27773992 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-396 |
| Cow position: | chr10:57426310-57426540 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 164-398 |
| Cow position: | chr10:21669013-21669244 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 81 |
| Conread position: | 164-399 |
| Cow position: | chr10:18044249-18044018 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 149, 94 |
| Conread position: | 164-408 |
| Cow position: | chr10:6228951-6229196 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 164-408 |
| Cow position: | chr10:46749511-46749267 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-548 |
| Cow position: | chr10:52426130-52426508 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 94 |
| Conread position: | 164-641 |
| Cow position: | chr10:33154998-33155463 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 92 |
| Conread position: | 164-650 |
| Cow position: | chr10:6603771-6603286 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 42 |
| Conread position: | 165-296 |
| Cow position: | chr10:10108070-10107941 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 165-379 |
| Cow position: | chr10:19972172-19972383 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 152, 31 |
| Conread position: | 165-392 |
| Cow position: | chr10:33845583-33845806 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 47 |
| Conread position: | 165-396 |
| Cow position: | chr10:4541777-4542001 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 165-396 |
| Cow position: | chr10:15173242-15173015 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 25 |
| Conread position: | 165-396 |
| Cow position: | chr10:19974541-19974318 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 93 |
| Conread position: | 165-396 |
| Cow position: | chr10:32880654-32880884 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 97 |
| Conread position: | 165-396 |
| Cow position: | chr10:53108339-53108565 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 98 |
| Conread position: | 165-396 |
| Cow position: | chr10:66618152-66618380 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 153, 62 |
| Conread position: | 165-399 |
| Cow position: | chr10:33481654-33481427 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-399 |
| Cow position: | chr10:36757817-36758049 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 18 |
| Conread position: | 165-418 |
| Cow position: | chr10:37052247-37052517 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 165-586 |
| Cow position: | chr10:52418914-52419324 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 93 |
| Conread position: | 165-638 |
| Cow position: | chr10:10346406-10346878 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 162, 36 |
| Conread position: | 165-655 |
| Cow position: | chr10:52671073-52671566 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 166-398 |
| Cow position: | chr10:34165233-34165464 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 92 |
| Conread position: | 166-548 |
| Cow position: | chr10:28227929-28228305 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 31 |
| Conread position: | 167-398 |
| Cow position: | chr10:68822405-68822180 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 91 |
| Conread position: | 171-397 |
| Cow position: | chr10:69233977-69234194 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 172-395 |
| Cow position: | chr10:25639056-25639268 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 147, 86 |
| Conread position: | 172-605 |
| Cow position: | chr10:27376107-27375679 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 89 |
| Conread position: | 176-641 |
| Cow position: | chr10:55346570-55346123 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 184-649 |
| Cow position: | chr10:69647142-69646686 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 315 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 190-396 |
| Cow position: | chr10:53900646-53900841 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 130, 57 |
| Conread position: | 202-285 |
| Cow position: | chr10:24895217-24895136 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 202-396 |
| Cow position: | chr10:25943596-25943789 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 56 |
| Conread position: | 203-409 |
| Cow position: | chr10:17857204-17857005 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 120, 36 |
| Conread position: | 204-418 |
| Cow position: | chr10:10110301-10110514 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 219-505 |
| Cow position: | chr10:44981685-44981398 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 245-398 |
| Cow position: | chr10:59336387-59336538 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 256-401 |
| Cow position: | chr10:15167838-15167986 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 261-395 |
| Cow position: | chr10:65956663-65956528 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 423-641 |
| Cow position: | chr10:19974312-19974085 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 12 |
Show alignments to all cow chromosomes.