Cow genome map


           Conread name:
           Thy1-THY010074B02
        

               Conread position:
               65-494
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               304
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               40, 69
               

               Conread position:
               123-638
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               131-396
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               151-396
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               167, 107
               

               Conread position:
               157-405
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               161, 43
               

               Conread position:
               158-396
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               142, 9
               

               Conread position:
               158-637
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               336
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               11, 101
               

               Conread position:
               158-651
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 5
               

               Conread position:
               160-422
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 103
               

               Conread position:
               160-425
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               153, 98
               

               Conread position:
               162-506
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 21
               

               Conread position:
               163-303
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 20
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               163-398
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               153, 43
               

               Conread position:
               163-401
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 100
               

               Conread position:
               164-337
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-382
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-384
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               41, 85
               

               Conread position:
               164-395
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 86
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 74
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               119, 94
               

               Conread position:
               164-399
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 94
               

               Conread position:
               164-405
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 77
               

               Conread position:
               164-422
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               154, 17
               

               Conread position:
               164-650
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 99
               

               Conread position:
               165-274
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               165-302
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 56
               

               Conread position:
               165-341
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               165-343
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-359
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               153, 76
               

               Conread position:
               165-385
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-389
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               165-392
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-392
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 84
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-500
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 18
               

               Conread position:
               165-501
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-641
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-641
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 97
               

               Conread position:
               166-410
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 46
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 34
               

               Conread position:
               167-405
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               171-396
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 87
               

               Conread position:
               171-398
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               148, 87
               

               Conread position:
               174-505
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 89
               

               Conread position:
               203-396
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               209-505
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 53
               

               Conread position:
               213-396
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               218-422
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               102, 43
               
Show alignments to all cow chromosomes.